Literature DB >> 15131163

Detection and differentiation of human parvovirus variants by commercial quantitative real-time PCR tests.

Kati Hokynar1, Päivi Norja, Harri Laitinen, Pekka Palomäki, Antoine Garbarg-Chenon, Annamari Ranki, Klaus Hedman, Maria Söderlund-Venermo.   

Abstract

Parvovirus B19 causes a variety of diseases in humans, with outcomes ranging from asymptomatic to severe, such as chronic anemia in immunocompromised patients or fetal hydrops and death after maternal infection during pregnancy. The virus may be transmitted via plasma-derived products. According to the results of solvent-detergent safety studies, an upper limit of B19 DNA in plasma pools was recently defined. To restrict the input of B19 virus into production pools, a quantitative nucleic acid test is a prerequisite. We examined the suitability of the two commercial quantitative B19 PCR tests, LightCycler-Parvovirus B19 quantification kit (Roche Diagnostics) and RealArt Parvo B19 LC PCR (Artus) for detection, quantification, and differentiation of the three known B19 genotypes, including the newly described erythrovirus variants (genotypes 2 and 3). The former kit was highly sensitive for genotype 1 but was not suitable for detection of genotype 2 or one of two genotype 3 strains. The latter kit detected and differentiated all three genotypes, albeit with lower sensitivity for one of the genotype-3 strains. We furthermore assessed the prevalence of the three B19 virus genotypes in blood donors, by screening pooled plasma samples derived from 140,160 Finnish blood-donor units. None of the pools contained detectable levels of B19 virus genotypes 2 or 3. The origin, mode of transmission, and clinical significance of these genotypes are unknown and deserve further study. The RealArt Parvo B19 LC PCR is suitable for detection, quantification, and differentiation of all three B19 virus genotypes in molecular and clinical research.

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Year:  2004        PMID: 15131163      PMCID: PMC404683          DOI: 10.1128/JCM.42.5.2013-2019.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  29 in total

1.  Quantitative evidence for persistence of human parvovirus B19 DNA in an immunocompetent individual.

Authors:  P Cassinotti; G Siegl
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2000-11       Impact factor: 3.267

2.  Establishment of the first World Health Organization International Standard for human parvovirus B19 DNA nucleic acid amplification techniques.

Authors:  J Saldanha; N Lelie; M W Yu; A Heath
Journal:  Vox Sang       Date:  2002-01       Impact factor: 2.144

3.  Genetic diversity within human erythroviruses: identification of three genotypes.

Authors:  Annabelle Servant; Syria Laperche; Francis Lallemand; Valérie Marinho; Guillemette De Saint Maur; Jean François Meritet; Antoine Garbarg-Chenon
Journal:  J Virol       Date:  2002-09       Impact factor: 5.103

Review 4.  Presence and significance of parvovirus B19 in blood and blood products.

Authors:  G Siegl; P Cassinotti
Journal:  Biologicals       Date:  1998-06       Impact factor: 1.856

5.  Prevalence of parvovirus B19 and parvovirus V9 DNA and antibodies in paired bone marrow and serum samples from healthy individuals.

Authors:  Erik D Heegaard; Bodil Laub Petersen; Carsten J Heilmann; Allan Hornsleth
Journal:  J Clin Microbiol       Date:  2002-03       Impact factor: 5.948

6.  Development of a pharmaceutical apotransferrin product for iron binding therapy.

Authors:  L von Bonsdorff; H Tölö; E Lindeberg; T Nyman; A Harju; J Parkkinen
Journal:  Biologicals       Date:  2001-03       Impact factor: 1.856

7.  Integrity and full coding sequence of B19 virus DNA persisting in human synovial tissue.

Authors:  K Hokynar; J Brunstein; M Söderlund-Venermo; O Kiviluoto; E K Partio; Y Konttinen; K Hedman
Journal:  J Gen Virol       Date:  2000-04       Impact factor: 3.891

8.  Novel PCR assay for differential detection and screening of erythrovirus B19 and erythrovirus V9.

Authors:  E D Heegaard; I Panum Jensen; J Christensen
Journal:  J Med Virol       Date:  2001-10       Impact factor: 2.327

9.  Parvovirus B19 clearance from peripheral blood after acute infection.

Authors:  M Musiani; M Zerbini; G Gentilomi; M Plazzi; G Gallinella; S Venturoli
Journal:  J Infect Dis       Date:  1995-11       Impact factor: 5.226

10.  The prevalence of antibody to parvovirus B19 in hemophiliacs and in the general population.

Authors:  A M Eis-Hübinger; J Oldenburg; H H Brackmann; B Matz; K E Schneweis
Journal:  Zentralbl Bakteriol       Date:  1996-07
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  19 in total

Review 1.  Real-time PCR in clinical microbiology: applications for routine laboratory testing.

Authors:  M J Espy; J R Uhl; L M Sloan; S P Buckwalter; M F Jones; E A Vetter; J D C Yao; N L Wengenack; J E Rosenblatt; F R Cockerill; T F Smith
Journal:  Clin Microbiol Rev       Date:  2006-01       Impact factor: 26.132

2.  Biological and immunological relations among human parvovirus B19 genotypes 1 to 3.

Authors:  Anna Ekman; Kati Hokynar; Laura Kakkola; Kalle Kantola; Lea Hedman; Heidi Bondén; Matthias Gessner; Claudia Aberham; Päivi Norja; Simo Miettinen; Klaus Hedman; Maria Söderlund-Venermo
Journal:  J Virol       Date:  2007-04-04       Impact factor: 5.103

3.  Keeping pace with parvovirus B19 genetic variability: a multiplex genotype-specific quantitative PCR assay.

Authors:  Francesca Bonvicini; Elisabetta Manaresi; Gloria Bua; Simona Venturoli; Giorgio Gallinella
Journal:  J Clin Microbiol       Date:  2013-09-04       Impact factor: 5.948

4.  Identification and characterization of persistent human erythrovirus infection in blood donor samples.

Authors:  Daniel Candotti; Nermin Etiz; Armen Parsyan; Jean-Pierre Allain
Journal:  J Virol       Date:  2004-11       Impact factor: 5.103

5.  Sequence variability of human erythroviruses present in bone marrow of Brazilian patients with various parvovirus B19-related hematological symptoms.

Authors:  Sabri Sanabani; Walter Kleine Neto; Juliana Pereira; Ester Cerdeira Sabino
Journal:  J Clin Microbiol       Date:  2006-02       Impact factor: 5.948

6.  Quantitative competitive-PCR assay to measure human parvovirus B19-DNA load in serum samples.

Authors:  Massimiliano Bergallo; Chiara Merlino; Roberta Daniele; Cristina Costa; Alessandro Negro Ponzi; Rossana Cavallo
Journal:  Mol Biotechnol       Date:  2006-01       Impact factor: 2.695

7.  Bioportfolio: lifelong persistence of variant and prototypic erythrovirus DNA genomes in human tissue.

Authors:  Päivi Norja; Kati Hokynar; Leena-Maija Aaltonen; Renwei Chen; Annamari Ranki; Esa K Partio; Olli Kiviluoto; Irja Davidkin; Tomi Leivo; Anna Maria Eis-Hübinger; Beate Schneider; Hans-Peter Fischer; René Tolba; Olli Vapalahti; Antti Vaheri; Maria Söderlund-Venermo; Klaus Hedman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-01       Impact factor: 11.205

8.  Erythroid progenitor cells expanded from peripheral blood without mobilization or preselection: molecular characteristics and functional competence.

Authors:  Claudia Filippone; Rauli Franssila; Arun Kumar; Leena Saikko; Panu E Kovanen; Maria Söderlund-Venermo; Klaus Hedman
Journal:  PLoS One       Date:  2010-03-02       Impact factor: 3.240

9.  Genetic variants of human parvovirus B19 in South Africa: cocirculation of three genotypes and identification of a novel subtype of genotype 1.

Authors:  Craig Corcoran; Diana Hardie; Jane Yeats; Heidi Smuts
Journal:  J Clin Microbiol       Date:  2009-11-18       Impact factor: 5.948

10.  Phylogenetic analysis of human parvovirus b19 sequences from eleven different countries confirms the predominance of genotype 1 and suggests the spread of genotype 3b.

Authors:  Judith M Hübschen; Zefira Mihneva; Andreas F Mentis; François Schneider; Yair Aboudy; Zehava Grossman; Hagit Rudich; Kalia Kasymbekova; Inna Sarv; Jasminka Nedeljkovic; Marc C Tahita; Zekiba Tarnagda; Jean-Bosco Ouedraogo; A G Gerasimova; T N Moskaleva; Nina T Tikhonova; Nazibrola Chitadze; J C Forbi; Adedayo O Faneye; Jesse A Otegbayo; Emilie Charpentier; Claude P Muller
Journal:  J Clin Microbiol       Date:  2009-09-09       Impact factor: 5.948

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