Literature DB >> 15126462

PhaQ, a new class of poly-beta-hydroxybutyrate (phb)-responsive repressor, regulates phaQ and phaP (phasin) expression in Bacillus megaterium through interaction with PHB.

Tian-Ren Lee1, Jer-Sheng Lin, Shih-Shin Wang, Gwo-Chyuan Shaw.   

Abstract

Bacillus megaterium can produce poly-beta-hydroxybutyrate (PHB) as carbon and energy storage materials. We now report that the phaQ gene, which is located upstream of the phasin-encoding phaP gene, codes for a new class of transcriptional regulator that negatively controls expression of both phaQ and phaP. A PhaQ binding site that plays a role in this control has been identified by gel mobility shift assays and DNase I footprinting analysis. We have also provided evidence that PhaQ could sense the presence of PHB in vivo and that artificial PHB granules could inhibit the formation of PhaQ-DNA complex in vitro by binding to PhaQ directly. These suggest that PhaQ is a PHB-responsive repressor.

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Year:  2004        PMID: 15126462      PMCID: PMC400616          DOI: 10.1128/JB.186.10.3015-3021.2004

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  29 in total

1.  Polyhydroxyalkanoate inclusion body-associated proteins and coding region in Bacillus megaterium.

Authors:  G J McCool; M C Cannon
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

2.  New insight into the role of the PhaP phasin of Ralstonia eutropha in promoting synthesis of polyhydroxybutyrate.

Authors:  G M York; J Stubbe; A J Sinskey
Journal:  J Bacteriol       Date:  2001-04       Impact factor: 3.490

3.  PhaC and PhaR are required for polyhydroxyalkanoic acid synthase activity in Bacillus megaterium.

Authors:  G J McCool; M C Cannon
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

5.  Analyses of a polyhydroxyalkanoic acid granule-associated 16-kilodalton protein and its putative regulator in the pha locus of Paracoccus denitrificans.

Authors:  A Maehara; S Ueda; H Nakano; T Yamane
Journal:  J Bacteriol       Date:  1999-05       Impact factor: 3.490

6.  The Ralstonia eutropha PhaR protein couples synthesis of the PhaP phasin to the presence of polyhydroxybutyrate in cells and promotes polyhydroxybutyrate production.

Authors:  Gregory M York; JoAnne Stubbe; Anthony J Sinskey
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

7.  Transcriptional regulation of the Bacillus subtilis bscR-CYP102A3 operon by the BscR repressor and differential induction of cytochrome CYP102A3 expression by oleic acid and palmitate.

Authors:  T R Lee; H P Hsu; G C Shaw
Journal:  J Biochem       Date:  2001-10       Impact factor: 3.387

Review 8.  Metabolic engineering of poly(3-hydroxyalkanoates): from DNA to plastic.

Authors:  L L Madison; G W Huisman
Journal:  Microbiol Mol Biol Rev       Date:  1999-03       Impact factor: 11.056

9.  Regulation of phasin expression and polyhydroxyalkanoate (PHA) granule formation in Ralstonia eutropha H16.

Authors:  Markus Pötter; Mohamed H Madkour; Frank Mayer; Alexander Steinbüchel
Journal:  Microbiology       Date:  2002-08       Impact factor: 2.777

10.  The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria.

Authors:  Timothy D Read; Scott N Peterson; Nicolas Tourasse; Les W Baillie; Ian T Paulsen; Karen E Nelson; Hervé Tettelin; Derrick E Fouts; Jonathan A Eisen; Steven R Gill; Erik K Holtzapple; Ole Andreas Okstad; Erlendur Helgason; Jennifer Rilstone; Martin Wu; James F Kolonay; Maureen J Beanan; Robert J Dodson; Lauren M Brinkac; Michelle Gwinn; Robert T DeBoy; Ramana Madpu; Sean C Daugherty; A Scott Durkin; Daniel H Haft; William C Nelson; Jeremy D Peterson; Mihai Pop; Hoda M Khouri; Diana Radune; Jonathan L Benton; Yasmin Mahamoud; Lingxia Jiang; Ioana R Hance; Janice F Weidman; Kristi J Berry; Roger D Plaut; Alex M Wolf; Kisha L Watkins; William C Nierman; Alyson Hazen; Robin Cline; Caroline Redmond; Joanne E Thwaite; Owen White; Steven L Salzberg; Brendan Thomason; Arthur M Friedlander; Theresa M Koehler; Philip C Hanna; Anne-Brit Kolstø; Claire M Fraser
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

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  9 in total

Review 1.  Polyhydroxyalkanoate granules are complex subcellular organelles (carbonosomes).

Authors:  Dieter Jendrossek
Journal:  J Bacteriol       Date:  2009-03-06       Impact factor: 3.490

2.  Identification and characterization of a novel intracellular poly(3-hydroxybutyrate) depolymerase from Bacillus megaterium.

Authors:  Hui-Ju Chen; Shih-Chuan Pan; Gwo-Chyuan Shaw
Journal:  Appl Environ Microbiol       Date:  2009-06-26       Impact factor: 4.792

3.  Identification and characterization of the Bacillus thuringiensis phaZ gene, encoding new intracellular poly-3-hydroxybutyrate depolymerase.

Authors:  Chi-Ling Tseng; Hui-Ju Chen; Gwo-Chyuan Shaw
Journal:  J Bacteriol       Date:  2006-08-25       Impact factor: 3.490

4.  A novel DNA-binding protein, PhaR, plays a central role in the regulation of polyhydroxyalkanoate accumulation and granule formation in the haloarchaeon Haloferax mediterranei.

Authors:  Shuangfeng Cai; Lei Cai; Dahe Zhao; Guiming Liu; Jing Han; Jian Zhou; Hua Xiang
Journal:  Appl Environ Microbiol       Date:  2014-10-24       Impact factor: 4.792

Review 5.  An updated overview on the regulatory circuits of polyhydroxyalkanoates synthesis.

Authors:  Ruchira Mitra; Tong Xu; Guo-Qiang Chen; Hua Xiang; Jing Han
Journal:  Microb Biotechnol       Date:  2021-09-02       Impact factor: 6.575

Review 6.  Phasins, Multifaceted Polyhydroxyalkanoate Granule-Associated Proteins.

Authors:  Mariela P Mezzina; M Julia Pettinari
Journal:  Appl Environ Microbiol       Date:  2016-08-15       Impact factor: 4.792

7.  Comparative proteomic analysis of high cell density cultivations with two recombinant Bacillus megaterium strains for the production of a heterologous dextransucrase.

Authors:  Wei Wang; Rajan Hollmann; Wolf-Dieter Deckwer
Journal:  Proteome Sci       Date:  2006-10-05       Impact factor: 2.480

8.  Recovery of Heat Treated Bacillus cereus Spores Is Affected by Matrix Composition and Factors with Putative Functions in Damage Repair.

Authors:  Alicja K Warda; Marcel H Tempelaars; Tjakko Abee; Masja N Nierop Groot
Journal:  Front Microbiol       Date:  2016-07-18       Impact factor: 5.640

9.  Poly(3-hydroxybutyrate) hyperproduction by a global nitrogen regulator NtrB mutant strain of Paracoccus denitrificans PD1222.

Authors:  Alfonso Olaya-Abril; Víctor M Luque-Almagro; Isabel Manso; Andrew J Gates; Conrado Moreno-Vivián; David J Richardson; María Dolores Roldán
Journal:  FEMS Microbiol Lett       Date:  2018-01-01       Impact factor: 2.742

  9 in total

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