Literature DB >> 15120992

Ribosome biogenesis: of knobs and RNA processing.

Sander Granneman1, Susan J Baserga.   

Abstract

The synthesis of ribosomes in eukaryotes involves processing of pre-ribosomal RNA (pre-rRNA) and sequential assembly of a large number of ribosomal proteins on the rRNAs. Although we have gained tremendous insights into the processing of pre-rRNA intermediates in the last three decades, little was known about the dynamic nature of ribosome biogenesis. Only recently the development of efficient affinity-purification procedures and mass-spectrometry techniques has allowed the isolation of large pre-ribosomal complexes, which led to the identification of several ribosome assembly intermediates and a large number of novel ribosome assembly factors. In this mini-review, we summarize some of the discoveries that have been made in the field of ribosome biogenesis in the past 30 years and highlight some key aspects about what remains to be learned.

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Year:  2004        PMID: 15120992     DOI: 10.1016/j.yexcr.2004.03.016

Source DB:  PubMed          Journal:  Exp Cell Res        ISSN: 0014-4827            Impact factor:   3.905


  117 in total

Review 1.  Taming free energy landscapes with RNA chaperones.

Authors:  Sarah A Woodson
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

Review 2.  The nucleolus.

Authors:  Thoru Pederson
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-03-01       Impact factor: 10.005

Review 3.  When ribosomes go bad: diseases of ribosome biogenesis.

Authors:  Emily F Freed; Franziska Bleichert; Laura M Dutca; Susan J Baserga
Journal:  Mol Biosyst       Date:  2010-01-11

4.  The small-subunit processome is a ribosome assembly intermediate.

Authors:  Kara A Bernstein; Jennifer E G Gallagher; Brianna M Mitchell; Sander Granneman; Susan J Baserga
Journal:  Eukaryot Cell       Date:  2004-12

5.  Analysis of sequence and structural features that identify the B/C motif of U3 small nucleolar RNA as the recognition site for the Snu13p-Rrp9p protein pair.

Authors:  A Cléry; V Senty-Ségault; F Leclerc; H A Raué; C Branlant
Journal:  Mol Cell Biol       Date:  2006-12-04       Impact factor: 4.272

6.  Comprehensive mutational analysis of yeast DEXD/H box RNA helicases required for small ribosomal subunit synthesis.

Authors:  Sander Granneman; Kara A Bernstein; Franziska Bleichert; Susan J Baserga
Journal:  Mol Cell Biol       Date:  2006-02       Impact factor: 4.272

7.  Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes.

Authors:  Tracey C Fleischer; Connie M Weaver; K Jill McAfee; Jennifer L Jennings; Andrew J Link
Journal:  Genes Dev       Date:  2006-05-15       Impact factor: 11.361

8.  RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components.

Authors:  Jennifer E G Gallagher; David A Dunbar; Sander Granneman; Brianna M Mitchell; Yvonne Osheim; Ann L Beyer; Susan J Baserga
Journal:  Genes Dev       Date:  2004-10-15       Impact factor: 11.361

9.  Ribosome RNA assembly intermediates visualized in living cells.

Authors:  Jennifer L McGinnis; Kevin M Weeks
Journal:  Biochemistry       Date:  2014-05-12       Impact factor: 3.162

10.  Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus.

Authors:  Sang Hyon Kim; Olga A Koroleva; Dominika Lewandowska; Ali F Pendle; Gillian P Clark; Craig G Simpson; Peter J Shaw; John W S Brown
Journal:  Plant Cell       Date:  2009-07-14       Impact factor: 11.277

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