Literature DB >> 11738171

Proton transfer at carbon.

J P Richard1, T L Amyes.   

Abstract

The viability of living systems requires that C--H bonds of biological molecules be stable in water, but that there also be a mechanism for shortening the timescale for their heterolytic cleavage through enzymatic catalysis of a variety of catabolic and metabolic reactions. An understanding of the mechanism of enzymatic catalysis of proton transfer at carbon requires the integration of results of studies to determine the structure of the enzyme-substrate complex with model studies on the mechanism for the non-enzymatic reaction in water, and the effect of the local protein environment on the stability of the transition state for this reaction. A common theme is the importance of electrostatic interactions in providing stabilization of bound carbanion intermediates of enzyme-catalyzed proton-transfer reactions.

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Year:  2001        PMID: 11738171     DOI: 10.1016/s1367-5931(01)00258-7

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  43 in total

1.  A paradigm for enzyme-catalyzed proton transfer at carbon: triosephosphate isomerase.

Authors:  John P Richard
Journal:  Biochemistry       Date:  2012-03-20       Impact factor: 3.162

2.  Design, synthesis and biological evaluation of multifunctional ligands targeting opioid and bradykinin 2 receptors.

Authors:  Srinivas Deekonda; David Rankin; Peg Davis; Josephine Lai; Frank Porreca; Victor J Hruby
Journal:  Bioorg Med Chem Lett       Date:  2015-08-14       Impact factor: 2.823

Review 3.  The PLP cofactor: lessons from studies on model reactions.

Authors:  John P Richard; Tina L Amyes; Juan Crugeiras; Ana Rios
Journal:  Biochim Biophys Acta       Date:  2010-12-20

4.  Structural insights into stereochemical inversion by diaminopimelate epimerase: an antibacterial drug target.

Authors:  Bindu Pillai; Maia M Cherney; Christopher M Diaper; Andrew Sutherland; John S Blanchard; John C Vederas; Michael N G James
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-24       Impact factor: 11.205

5.  Thermodynamic framework for identifying free energy inventories of enzyme catalytic cycles.

Authors:  Stephen D Fried; Steven G Boxer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-09       Impact factor: 11.205

6.  Structure and function of GDP-mannose-3',5'-epimerase: an enzyme which performs three chemical reactions at the same active site.

Authors:  Louise L Major; Beata A Wolucka; James H Naismith
Journal:  J Am Chem Soc       Date:  2005-12-28       Impact factor: 15.419

7.  Influence of stereochemistry on proton transfer in protonated tripeptide models.

Authors:  Namat Ali Soliman; Petr Kulhánek; Jaroslav Koča
Journal:  J Mol Model       Date:  2011-05-28       Impact factor: 1.810

Review 8.  Specificity in transition state binding: the Pauling model revisited.

Authors:  Tina L Amyes; John P Richard
Journal:  Biochemistry       Date:  2013-02-04       Impact factor: 3.162

9.  Structural, Electronic and Charge Transfer Studies of Highly Sensitive Fluorescent Probe 2-((E)-2-(1-phenyl-1H-phenanthro[9,10-d]imidazol-2-yl)vinyl)phenol: Quantum Chemical Investigations.

Authors:  V Thanikachalam; J Jayabharathi; A Arunpandiyan; P Ramanathan
Journal:  J Fluoresc       Date:  2013-10-06       Impact factor: 2.217

10.  The stereospecificity and catalytic efficiency of the tryptophan synthase-catalysed exchange of the alpha-protons of amino acids.

Authors:  Máire E Níbeilliú; J Paul G Malthouse
Journal:  Biochem J       Date:  2004-08-01       Impact factor: 3.857

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