Literature DB >> 15103641

The 1.59 A resolution crystal structure of TM0096, a flavin mononucleotide binding protein from Thermotoga maritima.

Frances Park1, Ketan Gajiwala, Brian Noland, Lydia Wu, Dongmei He, Janessa Molinari, Kim Loomis, Barbra Pagarigan, Peggy Kearins, Jon Christopher, Tom Peat, John Badger, Jorg Hendle, Johann Lin, Sean Buchanan.   

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Year:  2004        PMID： 15103641     DOI： 10.1002/prot.20086

Source DB:  PubMed          Journal:  Proteins        ISSN： 0887-3585


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  10 in total

1.  Crystallization and preliminary X-ray crystallographic analysis of dihydrouridine synthase from Thermus thermophilus and its complex with tRNA.

Authors:  Futao Yu; Yoshikazu Tanaka; Shiho Yamamoto; Akiyoshi Nakamura; Shunsuke Kita; Nagisa Hirano; Isao Tanaka; Min Yao
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-05-25

2.  Crystallization and preliminary X-ray crystallographic analysis of the catalytic domain of human dihydrouridine synthase.

Authors:  Sam Griffiths; Robert T Byrne; Alfred A Antson; Fiona Whelan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-02-22

3.  Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.

Authors:  Robert T Byrne; Huw T Jenkins; Daniel T Peters; Fiona Whelan; James Stowell; Naveed Aziz; Pavel Kasatsky; Marina V Rodnina; Eugene V Koonin; Andrey L Konevega; Alfred A Antson
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-22       Impact factor: 11.205

4.  Molecular basis of dihydrouridine formation on tRNA.

Authors:  Futao Yu; Yoshikazu Tanaka; Keitaro Yamashita; Takeo Suzuki; Akiyoshi Nakamura; Nagisa Hirano; Tsutomu Suzuki; Min Yao; Isao Tanaka
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-28       Impact factor: 11.205

Review 5.  The Dihydrouridine landscape from tRNA to mRNA: a perspective on synthesis, structural impact and function.

Authors:  Olivier Finet; Carlo Yague-Sanz; Florian Marchand; Damien Hermand
Journal:  RNA Biol       Date:  2022-01       Impact factor: 4.766

6.  Mechanism of dihydrouridine synthase 2 from yeast and the importance of modifications for efficient tRNA reduction.

Authors:  Lance W Rider; Mette B Ottosen; Samuel G Gattis; Bruce A Palfey
Journal:  J Biol Chem       Date:  2009-01-12       Impact factor: 5.157

7.  Molecular evolution of dihydrouridine synthases.

Authors:  Joanna M Kasprzak; Anna Czerwoniec; Janusz M Bujnicki
Journal:  BMC Bioinformatics       Date:  2012-06-28       Impact factor: 3.169

8.  A novel family of integrases associated with prophages and genomic islands integrated within the tRNA-dihydrouridine synthase A (dusA) gene.

Authors:  Daniel N Farrugia; Liam D H Elbourne; Bridget C Mabbutt; Ian T Paulsen
Journal:  Nucleic Acids Res       Date:  2015-04-16       Impact factor: 16.971

9.  From bacterial to human dihydrouridine synthase: automated structure determination.

Authors:  Fiona Whelan; Huw T Jenkins; Samuel C Griffiths; Robert T Byrne; Eleanor J Dodson; Alfred A Antson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-06-30

10.  An extended dsRBD is required for post-transcriptional modification in human tRNAs.

Authors:  Charles Bou-Nader; Ludovic Pecqueur; Damien Bregeon; Amina Kamah; Vincent Guérineau; Béatrice Golinelli-Pimpaneau; Beatriz G Guimarães; Marc Fontecave; Djemel Hamdane
Journal:  Nucleic Acids Res       Date:  2015-10-01       Impact factor: 16.971
  10 in total

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