Literature DB >> 15100020

Proton-coupled electron transfer at the Qo-site of the bc1 complex controls the rate of ubihydroquinone oxidation.

Antony R Crofts1.   

Abstract

The rate-limiting reaction of the bc(1) complex from Rhodobacter sphaeroides is transfer of the first electron from ubihydroquinone (quinol, QH(2)) to the [2Fe-2S] cluster of the Rieske iron-sulfur protein (ISP) at the Q(o)-site. Formation of the ES-complex requires participation of two substrates (S), QH(2) and ISP(ox). From the variation of rate with [S], the binding constants for both substrates involved in formation of the complex can be estimated. The configuration of the ES-complex likely involves the dissociated form of the oxidized ISP (ISP(ox)) docked at the b-interface on cyt b, in a complex in which N(epsilon) of His-161 (bovine sequence) forms a H-bond with the quinol -OH. A coupled proton and electron transfer occurs along this H-bond. This brief review discusses the information available on the nature of this reaction from kinetic, structural and mutagenesis studies. The rate is much slower than expected from the distance involved, likely because it is controlled by the low probability of finding the proton in the configuration required for electron transfer. A simplified treatment of the activation barrier is developed in terms of a probability function determined by the Brønsted relationship, and a Marcus treatment of the electron transfer step. Incorporation of this relationship into a computer model allows exploration of the energy landscape. A set of parameters including reasonable values for activation energy, reorganization energy, distances between reactants, and driving forces, all consistent with experimental data, explains why the rate is slow, and accounts for the altered kinetics in mutant strains in which the driving force and energy profile are modified by changes in E(m) and/or pK of ISP or heme b(L).

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Year:  2004        PMID: 15100020     DOI: 10.1016/j.bbabio.2003.10.012

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  32 in total

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2.  Marcus treatment of endergonic reactions: a commentary.

Authors:  Antony R Crofts; Stuart Rose
Journal:  Biochim Biophys Acta       Date:  2007-07-06

Review 3.  pH-dependent regulation of electron transport and ATP synthesis in chloroplasts.

Authors:  Alexander N Tikhonov
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4.  Dissecting the pattern of proton release from partial process involved in ubihydroquinone oxidation in the Q-cycle.

Authors:  Charles A Wilson; Antony R Crofts
Journal:  Biochim Biophys Acta Bioenerg       Date:  2018-04-03       Impact factor: 3.991

5.  Modifications of protein environment of the [2Fe-2S] cluster of the bc1 complex: effects on the biophysical properties of the rieske iron-sulfur protein and on the kinetics of the complex.

Authors:  Sangmoon Lhee; Derrick R J Kolling; Satish K Nair; Sergei A Dikanov; Antony R Crofts
Journal:  J Biol Chem       Date:  2009-12-20       Impact factor: 5.157

Review 6.  Biochemistry and theory of proton-coupled electron transfer.

Authors:  Agostino Migliore; Nicholas F Polizzi; Michael J Therien; David N Beratan
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

7.  Functional characterization and target validation of alternative complex I of Plasmodium falciparum mitochondria.

Authors:  Giancarlo A Biagini; Parnpen Viriyavejakul; Paul M O'neill; Patrick G Bray; Stephen A Ward
Journal:  Antimicrob Agents Chemother       Date:  2006-05       Impact factor: 5.191

8.  Mechanism of the Primary Charge Transfer Reaction in the Cytochrome bc1 Complex.

Authors:  Angela M Barragan; Klaus Schulten; Ilia A Solov'yov
Journal:  J Phys Chem B       Date:  2016-10-12       Impact factor: 2.991

9.  NMR investigations of the Rieske protein from Thermus thermophilus support a coupled proton and electron transfer mechanism.

Authors:  Kuang-Lung Hsueh; William M Westler; John L Markley
Journal:  J Am Chem Soc       Date:  2010-06-16       Impact factor: 15.419

10.  Structure of the cytochrome b6f complex: quinone analogue inhibitors as ligands of heme cn.

Authors:  E Yamashita; H Zhang; W A Cramer
Journal:  J Mol Biol       Date:  2007-04-12       Impact factor: 5.469

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