Literature DB >> 15090159

An autosampling differential scanning calorimeter instrument for studying molecular interactions.

Valerian Plotnikov1, Andrew Rochalski, Michael Brandts, John F Brandts, Samuel Williston, Verna Frasca, Lung-Nan Lin.   

Abstract

A new ultrasensitive differential scanning calorimeter (DSC) instrument is described, which utilizes autosampling for continuous operation. High scanning rates to 250 deg/h with rapid cooling and equilibration between scans facilitates higher sample throughput up to 50 samples during each 24 h of unattended operation. The instrument is suited for those pharmaceutical applications where higher throughput is important, such as screening drug candidates for binding constant or screening solution conditions for stability of liquid protein formulations. Results are presented on the binding of five different anionic inhibitors to ribonuclease A, which included cytidine 2'-monophosphate (2'CMP), 3'CMP, uridine 3'-monophosphate, pyrophosphate, and phosphate. Binding constants K(B) (or dissociation constants K(d)) are obtained from the shift in the transition temperature T(M) for ribonuclease thermal unfolding in the presence of ligand relative to the transition temperature in the absence of ligand. Measured binding constants ranged from 155 M(-1) (K(d) = 6.45 mM) for the weak-binding phosphate anion to 13100 M(-1) (K(d) = 76.3 microM) for the strongest binding ligand, 2'CMP. The DSC method for measuring binding constants can also be extended to ultratight interactions involving either ligand-protein or protein-protein binding.

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Year:  2002        PMID: 15090159     DOI: 10.1089/154065802761001338

Source DB:  PubMed          Journal:  Assay Drug Dev Technol        ISSN: 1540-658X            Impact factor:   1.738


  21 in total

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3.  Characterization of solution-phase drug-protein interactions by ultrafast affinity extraction.

Authors:  Sandya R Beeram; Xiwei Zheng; Kyungah Suh; David S Hage
Journal:  Methods       Date:  2018-03-03       Impact factor: 3.608

4.  Measuring Biomolecular DSC Profiles with Thermolabile Ligands to Rapidly Characterize Folding and Binding Interactions.

Authors:  Robert W Harkness V; Philip E Johnson; Anthony K Mittermaier
Journal:  J Vis Exp       Date:  2017-11-21       Impact factor: 1.355

5.  Exploring the Balance between DNA Pressure and Capsid Stability in Herpesviruses and Phages.

Authors:  D W Bauer; D Li; J Huffman; F L Homa; K Wilson; J C Leavitt; S R Casjens; J Baines; A Evilevitch
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6.  Crystal Structural and Functional Analysis of the Putative Dipeptidase from Pyrococcus horikoshii OT3.

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Journal:  J Biophys       Date:  2009-06-28

7.  Measuring protein-ligand interactions using liquid sample desorption electrospray ionization mass spectrometry.

Authors:  Pengyuan Liu; Jiang Zhang; Carly N Ferguson; Hao Chen; Joseph A Loo
Journal:  Anal Chem       Date:  2013-11-22       Impact factor: 6.986

8.  Conformational studies of the C-terminal 16-amino-acid-residue fragment of the B3 domain of the immunoglobulin binding protein G from Streptococcus.

Authors:  Agnieszka Skwierawska; Stanisław Ołdziej; Adam Liwo; Harold A Scheraga
Journal:  Biopolymers       Date:  2009-01       Impact factor: 2.505

9.  Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. I. Importance of hydrophobic interactions in stabilization of beta-hairpin structure.

Authors:  Agnieszka Skwierawska; Joanna Makowska; Stanisław Ołdziej; Adam Liwo; Harold A Scheraga
Journal:  Proteins       Date:  2009-06

10.  Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. III. Dynamics of long-range hydrophobic interactions.

Authors:  Agnieszka Lewandowska; Stanisław Ołdziej; Adam Liwo; Harold A Scheraga
Journal:  Proteins       Date:  2010-02-15
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