Literature DB >> 15082546

Mutation accumulation in populations of varying size: the distribution of mutational effects for fitness correlates in Caenorhabditis elegans.

Suzanne Estes1, Patrick C Phillips, Dee R Denver, W Kelley Thomas, Michael Lynch.   

Abstract

The consequences of mutation for population-genetic and evolutionary processes depend on the rate and, especially, the frequency distribution of mutational effects on fitness. We sought to approximate the form of the distribution of mutational effects by conducting divergence experiments in which lines of a DNA repair-deficient strain of Caenorhabditis elegans, msh-2, were maintained at a range of population sizes. Assays of these lines conducted in parallel with the ancestral control suggest that the mutational variance is dominated by contributions from highly detrimental mutations. This was evidenced by the ability of all but the smallest population-size treatments to maintain relatively high levels of mean fitness even under the 100-fold increase in mutational pressure caused by knocking out the msh-2 gene. However, we show that the mean fitness decline experienced by larger populations is actually greater than expected on the basis of our estimates of mutational parameters, which could be consistent with the existence of a common class of mutations with small individual effects. Further, comparison of the total mutation rate estimated from direct sequencing of DNA to that detected from phenotypic analyses implies the existence of a large class of evolutionarily relevant mutations with no measurable effect on laboratory fitness.

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Year:  2004        PMID: 15082546      PMCID: PMC1470770          DOI: 10.1534/genetics.166.3.1269

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  38 in total

1.  Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach.

Authors:  K D Entian; T Schuster; J H Hegemann; D Becher; H Feldmann; U Güldener; R Götz; M Hansen; C P Hollenberg; G Jansen; W Kramer; S Klein; P Kötter; J Kricke; H Launhardt; G Mannhaupt; A Maierl; P Meyer; W Mewes; T Munder; R K Niedenthal; M Ramezani Rad; A Röhmer; A Römer; A Hinnen
Journal:  Mol Gen Genet       Date:  1999-12

Review 2.  DNA mismatch repair and genetic instability.

Authors:  B D Harfe; S Jinks-Robertson
Journal:  Annu Rev Genet       Date:  2000       Impact factor: 16.830

3.  The rate of mutation and the homozygous and heterozygous mutational effects for competitive viability: a long-term experiment with Drosophila melanogaster.

Authors:  D Chavarrías; C López-Fanjul; A García-Dorado
Journal:  Genetics       Date:  2001-06       Impact factor: 4.562

4.  Control of GT repeat stability in Schizosaccharomyces pombe by mismatch repair factors.

Authors:  A A Mansour; C Tornier; E Lehmann; M Darmon; O Fleck
Journal:  Genetics       Date:  2001-05       Impact factor: 4.562

5.  High direct estimate of the mutation rate in the mitochondrial genome of Caenorhabditis elegans.

Authors:  D R Denver; K Morris; M Lynch; L L Vassilieva; W K Thomas
Journal:  Science       Date:  2000-09-29       Impact factor: 47.728

6.  The fitness effects of spontaneous mutations in Caenorhabditis elegans.

Authors:  L L Vassilieva; A M Hook; M Lynch
Journal:  Evolution       Date:  2000-08       Impact factor: 3.694

7.  Rapid mutational declines of viability in Drosophila.

Authors:  J D Fry
Journal:  Genet Res       Date:  2001-02       Impact factor: 1.588

8.  Estimates of the rate and distribution of fitness effects of spontaneous mutation in Saccharomyces cerevisiae.

Authors:  C Zeyl; J A DeVisser
Journal:  Genetics       Date:  2001-01       Impact factor: 4.562

Review 9.  Mammalian DNA mismatch repair.

Authors:  A B Buermeyer; S M Deschênes; S M Baker; R M Liskay
Journal:  Annu Rev Genet       Date:  1999       Impact factor: 16.830

10.  Direct estimate of the mutation rate and the distribution of fitness effects in the yeast Saccharomyces cerevisiae.

Authors:  D M Wloch; K Szafraniec; R H Borts; R Korona
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

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  50 in total

1.  Spontaneous mutational correlations for life-history, morphological and behavioral characters in Caenorhabditis elegans.

Authors:  Suzanne Estes; Beverly C Ajie; Michael Lynch; Patrick C Phillips
Journal:  Genetics       Date:  2005-04-16       Impact factor: 4.562

2.  Behavioral degradation under mutation accumulation in Caenorhabditis elegans.

Authors:  Beverly C Ajie; Suzanne Estes; Michael Lynch; Patrick C Phillips
Journal:  Genetics       Date:  2005-04-16       Impact factor: 4.562

3.  Genomic mutation in lines of Arabidopsis thaliana exposed to ultraviolet-B radiation.

Authors:  Joanna L MacKenzie; Fabienne E Saadé; Quang Hien Le; Thomas E Bureau; Daniel J Schoen
Journal:  Genetics       Date:  2005-07-05       Impact factor: 4.562

4.  Low impact of germline transposition on the rate of mildly deleterious mutation in Caenorhabditis elegans.

Authors:  Mattieu Bégin; Daniel J Schoen
Journal:  Genetics       Date:  2006-10-22       Impact factor: 4.562

5.  Accumulation of deleterious mutations in small abiotic populations of RNA.

Authors:  Steven J Soll; Carolina Díaz Arenas; Niles Lehman
Journal:  Genetics       Date:  2006-11-16       Impact factor: 4.562

6.  Neutral evolution of multiple quantitative characters: a genealogical approach.

Authors:  Cortland K Griswold; Benjamin Logsdon; Richard Gomulkiewicz
Journal:  Genetics       Date:  2007-03-04       Impact factor: 4.562

7.  Experimental estimate of the abundance and effects of nearly neutral mutations in the RNA virus phi 6.

Authors:  Christina L Burch; Sebastien Guyader; Daniel Samarov; Haipeng Shen
Journal:  Genetics       Date:  2007-03-04       Impact factor: 4.562

8.  The distribution of fitness effects of new deleterious amino acid mutations in humans.

Authors:  Adam Eyre-Walker; Megan Woolfit; Ted Phelps
Journal:  Genetics       Date:  2006-03-17       Impact factor: 4.562

9.  Complex genetic changes in strains of Saccharomyces cerevisiae derived by selection in the laboratory.

Authors:  Joshua T Witten; Christina T L Chen; Barak A Cohen
Journal:  Genetics       Date:  2007-07-29       Impact factor: 4.562

Review 10.  Analysis and implications of mutational variation.

Authors:  Peter D Keightley; Daniel L Halligan
Journal:  Genetica       Date:  2008-07-29       Impact factor: 1.082

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