Literature DB >> 15077014

Aryl hydrocarbon receptor polymorphisms and dioxin resistance in Atlantic killifish (Fundulus heteroclitus).

Mark E Hahn1, Sibel I Karchner, Diana G Franks, Rebeka R Merson.   

Abstract

The aryl hydrocarbon receptor (AHR) gene encodes a ligand-activated transcription factor through which planar halogenated aromatic hydrocarbons (HAHs) such as 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) as well as polynuclear aromatic hydrocarbons (PAHs) cause altered gene expression and toxicity. To understand the role of AHR genetic variability in differential sensitivity to HAHs and PAHs, we are currently studying a population of the teleost Fundulus heteroclitus (Atlantic killifish) that has evolved genetic resistance to the toxic and biochemical effects of these compounds. Here, we report that the killifish AHR1 locus is highly polymorphic and that the frequencies of the major allele types differ between dioxin-sensitive and dioxin-resistant populations. Twenty-five single nucleotide polymorphisms (SNPs), nine of which are non-synonymous, were identified in the AHR1 coding sequence. Seven identified alleles were assigned to three groups, designated AHR1*1, AHR1*2 and AHR1*3. AHR1*1 alleles were under-represented in a population of dioxin- and polychlorinated biphenyl (PCB)-resistant fish from a PCB-contaminated Superfund site (New Bedford Harbor, Massachusetts, USA) compared to dioxin-sensitive fish from a less contaminated reference site (Scorton Creek, Massachusetts, USA). To determine the possible role of these AHR1 variants in differential HAH sensitivity, we expressed representative variant proteins from the two most divergent allelic groups (AHR1*1 and AHR1*3) by in-vitro transcription and translation and assessed their functional properties. AHR1*1A and AHR1*3A proteins displayed similar binding capacities and affinities for [H]TCDD. In transient transfection assays using mammalian cells, AHR1*1A and AHR1*3A exhibited similar abilities to support TCDD-dependent transactivation of a luciferase reporter gene under control of AHR-responsive enhancer elements. We discuss the possibility of other functional differences in AHR1 variants or their interaction with other killifish loci (AHR2, AHRR) that may contribute to differences in dioxin sensitivity.

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Year:  2004        PMID: 15077014     DOI: 10.1097/00008571-200402000-00007

Source DB:  PubMed          Journal:  Pharmacogenetics        ISSN: 0960-314X


  24 in total

1.  Annotation of the Nuclear Receptors in an Estuarine Fish species, Fundulus heteroclitus.

Authors:  William S Baldwin; W Tyler Boswell; Gautam Ginjupalli; Elizabeth J Litoff
Journal:  Nucl Receptor Res       Date:  2017

2.  Common mechanism underlies repeated evolution of extreme pollution tolerance.

Authors:  Andrew Whitehead; Whitney Pilcher; Denise Champlin; Diane Nacci
Journal:  Proc Biol Sci       Date:  2011-07-06       Impact factor: 5.349

3.  Estrogen responses in killifish (Fundulus heteroclitus) from polluted and unpolluted environments are site- and gene-specific.

Authors:  Sarah R Greytak; Ann M Tarrant; Diane Nacci; Mark E Hahn; Gloria V Callard
Journal:  Aquat Toxicol       Date:  2010-05-19       Impact factor: 4.964

4.  Phase 0 of the Xenobiotic Response: Nuclear Receptors and Other Transcription Factors as a First Step in Protection from Xenobiotics.

Authors:  William S Baldwin
Journal:  Nucl Receptor Res       Date:  2019-11-20

5.  Compound- and mixture-specific differences in resistance to polycyclic aromatic hydrocarbons and PCB-126 among Fundulus heteroclitus subpopulations throughout the Elizabeth River estuary (Virginia, USA).

Authors:  Bryan W Clark; Ellen M Cooper; Heather M Stapleton; Richard T Di Giulio
Journal:  Environ Sci Technol       Date:  2013-09-05       Impact factor: 9.028

6.  Genome-wide scan reveals signatures of selection related to pollution adaptation in non-model estuarine Atlantic killifish (Fundulus heteroclitus).

Authors:  J S Osterberg; K M Cammen; T F Schultz; B W Clark; R T Di Giulio
Journal:  Aquat Toxicol       Date:  2018-04-25       Impact factor: 4.964

7.  SNP identification, verification, and utility for population genetics in a non-model genus.

Authors:  Larissa M Williams; Xin Ma; Adam R Boyko; Carlos D Bustamante; Marjorie F Oleksiak
Journal:  BMC Genet       Date:  2010-04-30       Impact factor: 2.797

8.  Comparative analysis of homology models of the AH receptor ligand binding domain: verification of structure-function predictions by site-directed mutagenesis of a nonfunctional receptor.

Authors:  Domenico Fraccalvieri; Anatoly A Soshilov; Sibel I Karchner; Diana G Franks; Alessandro Pandini; Laura Bonati; Mark E Hahn; Michael S Denison
Journal:  Biochemistry       Date:  2013-01-14       Impact factor: 3.162

9.  Interaction of fish aryl hydrocarbon receptor paralogs (AHR1 and AHR2) with the retinoblastoma protein.

Authors:  Rebeka R Merson; Sibel I Karchner; Mark E Hahn
Journal:  Aquat Toxicol       Date:  2009-06-02       Impact factor: 4.964

10.  Fundulus as the premier teleost model in environmental biology: opportunities for new insights using genomics.

Authors:  Karen G Burnett; Lisa J Bain; William S Baldwin; Gloria V Callard; Sarah Cohen; Richard T Di Giulio; David H Evans; Marta Gómez-Chiarri; Mark E Hahn; Cindi A Hoover; Sibel I Karchner; Fumi Katoh; Deborah L Maclatchy; William S Marshall; Joel N Meyer; Diane E Nacci; Marjorie F Oleksiak; Bernard B Rees; Thomas D Singer; John J Stegeman; David W Towle; Peter A Van Veld; Wolfgang K Vogelbein; Andrew Whitehead; Richard N Winn; Douglas L Crawford
Journal:  Comp Biochem Physiol Part D Genomics Proteomics       Date:  2007-12       Impact factor: 2.674

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