Literature DB >> 15075408

Monomer topology defines folding speed of heptamer.

Neil Bascos1, Jesse Guidry, Pernilla Wittung-Stafshede.   

Abstract

Small monomeric proteins often fold in apparent two-state processes with folding speeds dictated by their native-state topology. Here we test, for the first time, the influence of monomer topology on the folding speed of an oligomeric protein: the heptameric cochaperonin protein 10 (cpn10), which in the native state has seven beta-barrel subunits noncovalently assembled through beta-strand pairing. Cpn10 is a particularly useful model because equilibrium-unfolding experiments have revealed that the denatured state in urea is that of a nonnative heptamer. Surprisingly, refolding of the nonnative cpn10 heptamer is a simple two-state kinetic process with a folding-rate constant in water (2.1 sec(-1); pH 7.0, 20 degrees C) that is in excellent agreement with the prediction based on the native-state topology of the cpn10 monomer. Thus, the monomers appear to fold as independent units, with a speed that correlates with topology, although the C and N termini are trapped in beta-strand pairing with neighboring subunits. In contrast, refolding of unfolded cpn10 monomers is dominated by a slow association step.

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Year:  2004        PMID: 15075408      PMCID: PMC2286762          DOI: 10.1110/ps.03559504

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  32 in total

1.  Release of both native and non-native proteins from a cis-only GroEL ternary complex.

Authors:  S G Burston; J S Weissman; G W Farr; W A Fenton; A L Horwich
Journal:  Nature       Date:  1996-09-05       Impact factor: 49.962

2.  The changing nature of the protein folding transition state: implications for the shape of the free-energy profile for folding.

Authors:  M Oliveberg; Y J Tan; M Silow; A R Fersht
Journal:  J Mol Biol       Date:  1998-04-10       Impact factor: 5.469

3.  Barriers to protein folding: formation of buried polar interactions is a slow step in acquisition of structure.

Authors:  C D Waldburger; T Jonsson; R T Sauer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-02       Impact factor: 11.205

Review 4.  Principles of protein-protein interactions.

Authors:  S Jones; J M Thornton
Journal:  Proc Natl Acad Sci U S A       Date:  1996-01-09       Impact factor: 11.205

5.  The crystal structure of the GroES co-chaperonin at 2.8 A resolution.

Authors:  J F Hunt; A J Weaver; S J Landry; L Gierasch; J Deisenhofer
Journal:  Nature       Date:  1996-01-04       Impact factor: 49.962

6.  Refolding of luciferase subunits from urea and assembly of the active heterodimer. Evidence for folding intermediates that precede and follow the dimerization step on the pathway to the active form of the enzyme.

Authors:  M M Ziegler; M E Goldberg; A F Chaffotte; T O Baldwin
Journal:  J Biol Chem       Date:  1993-05-25       Impact factor: 5.157

7.  GroES and the chaperonin-assisted protein folding cycle: GroES has no affinity for nucleotides.

Authors:  M J Todd; O Boudkin; E Freire; G H Lorimer
Journal:  FEBS Lett       Date:  1995-02-13       Impact factor: 4.124

8.  Temperature dependence of backbone dynamics in loops of human mitochondrial heat shock protein 10.

Authors:  S J Landry; N K Steede; K Maskos
Journal:  Biochemistry       Date:  1997-09-09       Impact factor: 3.162

9.  Characterization of the slow folding reactions of trp aporepressor from Escherichia coli by mutational analysis of prolines and catalysis by a peptidyl-prolyl isomerase.

Authors:  C J Mann; X Shao; C R Matthews
Journal:  Biochemistry       Date:  1995-11-07       Impact factor: 3.162

10.  Identification of nucleotide-binding regions in the chaperonin proteins GroEL and GroES.

Authors:  J Martin; S Geromanos; P Tempst; F U Hartl
Journal:  Nature       Date:  1993-11-18       Impact factor: 49.962

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  1 in total

1.  Oligomeric interfaces under the lens: gemini.

Authors:  Giovanni Feverati; Claire Lesieur
Journal:  PLoS One       Date:  2010-03-25       Impact factor: 3.240

  1 in total

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