Literature DB >> 15072748

Genetic and phylogenetic analyses of HIV-1 corroborate the transmission link hypothesis.

Mauro Pistello1, Barbara Del Santo, Stefano Buttò, Marino Bargagna, Ranieri Domenici, Mauro Bendinelli.   

Abstract

BACKGROUND: Phylogenetic and genetic analyses have proven a valuable tool to infer epidemiological links between human immunodeficiency virus type-1 (HIV-1) isolates. These methods were applied in the present report for studying the genetic relatedness of the viral strains involved in two episodes of suspected HIV-1 transmission.
OBJECTIVES: Provide any evidence that may help establish or refute the transmission link. STUDY
DESIGN: In the first case, a leukemic patient became HIV-1 positive following the transfusion of platelets from a donor who was subsequently found to have tested false HIV-seronegative and to be sexual partner to an infected woman. In the second, a wife claimed to have acquired the infection from her husband who had concealed his infected status. RESULTS AND
CONCLUSIONS: The viral pairs detected in each of the suspected transmission cases exhibited common amino acid signatures and low genetic distances and segregated together in phylogenetic trees, thus showing a level of genetic relatedness similar to reference pairs known with certainty to be epidemiologically linked. These findings corroborated the existence of a direct transmission link in both the episodes with a high level of confidence.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15072748     DOI: 10.1016/j.jcv.2003.08.008

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  4 in total

1.  Dynamics of haplotype frequency change in a CD8+TL epitope of simian immunodeficiency virus.

Authors:  Austin L Hughes; Shelby O'Connor; Dawn M Dudley; Benjamin J Burwitz; Benjamin N Bimber; David O'Connor
Journal:  Infect Genet Evol       Date:  2010-02-10       Impact factor: 3.342

2.  A HIV-1 heterosexual transmission chain in Guangzhou, China: a molecular epidemiological study.

Authors:  Zhigang Han; Tommy W C Leung; Jinkou Zhao; Ming Wang; Lirui Fan; Kai Li; Xinli Pang; Zhenbo Liang; Wilina W L Lim; Huifang Xu
Journal:  Virol J       Date:  2009-09-25       Impact factor: 4.099

Review 3.  Phylogenetic studies of transmission dynamics in generalized HIV epidemics: an essential tool where the burden is greatest?

Authors:  Ann M Dennis; Joshua T Herbeck; Andrew L Brown; Paul Kellam; Tulio de Oliveira; Deenan Pillay; Christophe Fraser; Myron S Cohen
Journal:  J Acquir Immune Defic Syndr       Date:  2014-10-01       Impact factor: 3.731

4.  Evolution of naturally occurring 5'non-coding region variants of Hepatitis C virus in human populations of the South American region.

Authors:  Gonzalo Moratorio; Mariela Martínez; María F Gutiérrez; Katiuska González; Rodney Colina; Fernando López-Tort; Lilia López; Ricardo Recarey; Alejandro G Schijman; María P Moreno; Laura García-Aguirre; Aura R Manascero; Juan Cristina
Journal:  Virol J       Date:  2007-08-02       Impact factor: 4.099

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.