Literature DB >> 15066036

Initial cos cleavage of bacteriophage lambda concatemers requires proheads and gpFI in vivo.

Jean Sippy1, Michael Feiss.   

Abstract

The development of bacteriophage lambda and double-stranded DNA viruses in general involves the convergence of two separate pathways: DNA replication and head assembly. Clearly, packaging will proceed only if an empty capsid shell, the prohead, is present to receive the DNA, but genetic evidence suggests that proheads play another role in the packaging process. For example, lambda phages with an amber mutation in any head gene or in FI, the gene encoding the accessory packaging protein gpFI, are able to produce normal amounts of DNA concatemers but they are not cut, or matured, into unit length chromosomes for packaging. Similar observations have been made for herpes simplex 1 virus. In the case of lambda, a negative model proposes that in the amber phages, unassembled capsid components are inhibitory to maturation, and a positive model suggests that assembled proheads are required for cutting. We tested the negative model by using a deletion mutant devoid of all prohead genes and FI in an in vivo cos cleavage assay; in this deleted phage, the cohesive ends were not cut. When lambda proheads and gpFI were provided in vivo via a second prophage, cutting was restored, and gpFI was required, results that support the positive model. Phage 21 is a sister phage of lambda, and although its capsid proteins share approximately 60% residue identity with lambda's, phage 21 proheads did not restore cutting, even when provided with the accessory protein gpFI. Models for the role of proheads and gpFI in cos cutting are discussed.

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Year:  2004        PMID: 15066036     DOI: 10.1111/j.1365-2958.2004.03990.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  9 in total

1.  Identification of cohesive ends and genes encoding the terminase of phage 16-3.

Authors:  Anita Ganyu; Zsolt Csiszovszki; Tamás Ponyi; András Kern; Zsuzsanna Buzás; László Orosz; Péter P Papp
Journal:  J Bacteriol       Date:  2005-04       Impact factor: 3.490

Review 2.  Little lambda, who made thee?

Authors:  Max E Gottesman; Robert A Weisberg
Journal:  Microbiol Mol Biol Rev       Date:  2004-12       Impact factor: 11.056

3.  Efficient DNA packaging of bacteriophage PRD1 requires the unique vertex protein P6.

Authors:  Nelli J Karhu; Gabija Ziedaite; Dennis H Bamford; Jaana K H Bamford
Journal:  J Virol       Date:  2007-01-03       Impact factor: 5.103

4.  Structural and biochemical characterization of phage λ FI protein (gpFI) reveals a novel mechanism of DNA packaging chaperone activity.

Authors:  Ana Popovic; Bin Wu; Cheryl H Arrowsmith; Aled M Edwards; Alan R Davidson; Karen L Maxwell
Journal:  J Biol Chem       Date:  2012-07-16       Impact factor: 5.157

5.  Single-molecule packaging initiation in real time by a viral DNA packaging machine from bacteriophage T4.

Authors:  Reza Vafabakhsh; Kiran Kondabagil; Tyler Earnest; Kyung Suk Lee; Zhihong Zhang; Li Dai; Karin A Dahmen; Venigalla B Rao; Taekjip Ha
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-06       Impact factor: 11.205

6.  HNH proteins are a widespread component of phage DNA packaging machines.

Authors:  Smriti Kala; Nichole Cumby; Paul D Sadowski; Batool Zafar Hyder; Voula Kanelis; Alan R Davidson; Karen L Maxwell
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-07       Impact factor: 11.205

Review 7.  Single-molecule studies of viral DNA packaging.

Authors:  Yann R Chemla; Douglas E Smith
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

8.  Staphylococcal pathogenicity island DNA packaging system involving cos-site packaging and phage-encoded HNH endonucleases.

Authors:  Nuria Quiles-Puchalt; Nuria Carpena; Juan C Alonso; Richard P Novick; Alberto Marina; José R Penadés
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-07       Impact factor: 11.205

9.  A pentameric protein ring with novel architecture is required for herpesviral packaging.

Authors:  Allison L Didychuk; Stephanie N Gates; Matthew R Gardner; Lisa M Strong; Andreas Martin; Britt A Glaunsinger
Journal:  Elife       Date:  2021-02-08       Impact factor: 8.140

  9 in total

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