Literature DB >> 15063859

Robust control in bacterial regulatory circuits.

Mark Goulian1.   

Abstract

Robust control refers to regulatory systems that are insensitive to perturbations to the intra- or extra-cellular environment. It is generally believed that most cell regulatory circuits should possess some degree of robustness. Examples of robust control and the underlying mechanisms for achieving this robustness are only beginning to be uncovered. Various forms of robustness are associated with circuits based on negative and/or positive feedback, bi-functional enzymes, protein oligomerization and discrete or continuous control.

Mesh:

Year:  2004        PMID: 15063859     DOI: 10.1016/j.mib.2004.02.002

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  14 in total

1.  An optimal number of molecules for signal amplification and discrimination in a chemical cascade.

Authors:  Yoshihiro Morishita; Tetsuya J Kobayashi; Kazuyuki Aihara
Journal:  Biophys J       Date:  2006-06-23       Impact factor: 4.033

2.  Multiple feedback loop design in the tryptophan regulatory network of Escherichia coli suggests a paradigm for robust regulation of processes in series.

Authors:  Sharad Bhartiya; Nikhil Chaudhary; K V Venkatesh; Francis J Doyle
Journal:  J R Soc Interface       Date:  2006-06-22       Impact factor: 4.118

3.  Input output robustness in simple bacterial signaling systems.

Authors:  Guy Shinar; Ron Milo; María Rodríguez Martínez; Uri Alon
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-06       Impact factor: 11.205

Review 4.  Design principles for robust biochemical reaction networks: what works, what cannot work, and what might almost work.

Authors:  Guy Shinar; Martin Feinberg
Journal:  Math Biosci       Date:  2011-03-04       Impact factor: 2.144

5.  Localization and cellular amounts of the WalRKJ (VicRKX) two-component regulatory system proteins in serotype 2 Streptococcus pneumoniae.

Authors:  Kyle J Wayne; Lok-To Sham; Ho-Ching T Tsui; Alina D Gutu; Skye M Barendt; Susan K Keen; Malcolm E Winkler
Journal:  J Bacteriol       Date:  2010-07-09       Impact factor: 3.490

6.  A systematic design method for robust synthetic biology to satisfy design specifications.

Authors:  Bor-Sen Chen; Chih-Hung Wu
Journal:  BMC Syst Biol       Date:  2009-06-30

7.  Functional organisation of Escherichia coli transcriptional regulatory network.

Authors:  Agustino Martínez-Antonio; Sarath Chandra Janga; Denis Thieffry
Journal:  J Mol Biol       Date:  2008-05-29       Impact factor: 5.469

Review 8.  Regulation by transcription factors in bacteria: beyond description.

Authors:  Enrique Balleza; Lucia N López-Bojorquez; Agustino Martínez-Antonio; Osbaldo Resendis-Antonio; Irma Lozada-Chávez; Yalbi I Balderas-Martínez; Sergio Encarnación; Julio Collado-Vides
Journal:  FEMS Microbiol Rev       Date:  2009-01       Impact factor: 16.408

9.  Robust synthetic biology design: stochastic game theory approach.

Authors:  Bor-Sen Chen; Chia-Hung Chang; Hsiao-Ching Lee
Journal:  Bioinformatics       Date:  2009-05-12       Impact factor: 6.937

10.  Switching Protein Conformational Substates by Protonation and Mutation.

Authors:  Abhishek Narayan; Athi N Naganathan
Journal:  J Phys Chem B       Date:  2018-08-10       Impact factor: 2.991

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