Literature DB >> 15063762

Genetic variations in humans associated with differences in the course of hepatitis C.

Takafumi Saito1, Guijin Ji, Haruhide Shinzawa, Kazuo Okumoto, Etsuko Hattori, Tohru Adachi, Tadashi Takeda, Kazuhiko Sugahara, Jun-itsu Ito, Hisayoshi Watanabe, Koji Saito, Hitoshi Togashi, Keisuke Ishii, Tadashi Matsuura, Kiyoshi Inageda, Masaaki Muramatsu, Sumio Kawata.   

Abstract

The outcome of hepatitis C virus (HCV) infection varies among individuals, but the genetic factors involved remain unknown. We conducted a population-based association study in which 238 Japanese individuals positive for anti-HCV antibody were genotyped for 269 single nucleotide polymorphisms (SNPs) in 103 candidate genes that might influence the course of infection. Altogether, 50 SNPs in 32 genes were listed. Genetic polymorphisms in IL4, IL8RB, IL10RA, PRL, ADA, NFKB1, GRAP2, CABIN1, IFNAR2, IFI27, IFI41, TNFRSF1A, ALDOB, AP1B1, SULT2B1, EGF, EGFR, TGFB1, LTBP2, and CD4 were associated with persistent viremia (P < 0.05), whereas those in IL1B, IL1RL1, IL2RB, IL12RB1, IL18R1, STAT5A, GRAP2, CABIN1, IFNAR1, Mx1, BMP8, FGL1, LTBP2, CD34, and CD80 were associated with different serum alanine aminotransferase levels in HCV carriers (P < 0.05). The sorted genes allow us to draw novel hypotheses for future studies of HCV infection to ultimately identify bona fide genes and their variations.

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Year:  2004        PMID: 15063762     DOI: 10.1016/j.bbrc.2004.03.056

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  19 in total

1.  Large-scale candidate gene analysis of spontaneous clearance of hepatitis C virus.

Authors:  Timothy L Mosbruger; Priya Duggal; James J Goedert; Gregory D Kirk; W Keith Hoots; Leslie H Tobler; Michael Busch; Marion G Peters; Hugo R Rosen; David L Thomas; Chloe L Thio
Journal:  J Infect Dis       Date:  2010-05-01       Impact factor: 5.226

2.  A gene for susceptibility to tuberculosis.

Authors:  David Secko
Journal:  CMAJ       Date:  2005-05-24       Impact factor: 8.262

3.  TagSNP evaluation for the association of 42 inflammation loci and vascular disease: evidence of IL6, FGB, ALOX5, NFKBIA, and IL4R loci effects.

Authors:  Christopher S Carlson; Patrick J Heagerty; Alex S Nord; David K Pritchard; Jane Ranchalis; Joshua M Boguch; Hangjun Duan; Thomas S Hatsukami; Stephen M Schwartz; Mark J Rieder; Deborah A Nickerson; Gail P Jarvik
Journal:  Hum Genet       Date:  2006-11-18       Impact factor: 4.132

4.  Ipr1 gene mediates innate immunity to tuberculosis.

Authors:  Hui Pan; Bo-Shiun Yan; Mauricio Rojas; Yuriy V Shebzukhov; Hongwei Zhou; Lester Kobzik; Darren E Higgins; Mark J Daly; Barry R Bloom; Igor Kramnik
Journal:  Nature       Date:  2005-04-07       Impact factor: 49.962

5.  No associations of human pulmonary tuberculosis with Sp110 variants.

Authors:  T Thye; E N Browne; M A Chinbuah; J Gyapong; I Osei; E Owusu-Dabo; S Niemann; S Rüsch-Gerdes; R D Horstmann; C G Meyer
Journal:  J Med Genet       Date:  2006-07       Impact factor: 6.318

6.  Variants in the SP110 gene are associated with genetic susceptibility to tuberculosis in West Africa.

Authors:  Kerrie Tosh; Sarah J Campbell; Katherine Fielding; Jackson Sillah; Boubacar Bah; Per Gustafson; Kebba Manneh; Ida Lisse; Giorgio Sirugo; Steve Bennett; Peter Aaby; Keith P W J McAdam; Oumou Bah-Sow; Christian Lienhardt; Igor Kramnik; Adrian V S Hill
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-27       Impact factor: 11.205

7.  In vivo expression of innate immunity markers in patients with Mycobacterium tuberculosis infection.

Authors:  Pantelis Constantoulakis; Eftihia Filiou; Nikoletta Rovina; George Chras; Aggeliki Hamhougia; Simona Karabela; Adamandia Sotiriou; Charis Roussos; Nikolaos Poulakis
Journal:  BMC Infect Dis       Date:  2010-08-18       Impact factor: 3.090

8.  Molecular characterization of Sp110 gene in pigs.

Authors:  Li-Zu Li; Qiu-Shi Wang; Li-Xin Han; Jin-Kui Wang; Si-Yu Shao; Liang Wang; Di Liu; Xiu-Qin Yang
Journal:  Mol Genet Genomics       Date:  2016-03-19       Impact factor: 3.291

Review 9.  Molecular and contextual markers of hepatitis C virus and drug abuse.

Authors:  Paul Shapshak; Charurut Somboonwit; Lydia N Drumright; Simon D W Frost; Deborah Commins; Timothy L Tellinghuisen; William K Scott; Robert Duncan; Clyde McCoy; J Bryan Page; Brian Giunta; Francisco Fernandez; Elyse Singer; Andrew Levine; Alireza Minagar; Oluwadayo Oluwadara; Taiwo Kotila; Francesco Chiappelli; John T Sinnott
Journal:  Mol Diagn Ther       Date:  2009       Impact factor: 4.074

10.  PD1 as a common candidate susceptibility gene of subacute sclerosing panencephalitis.

Authors:  Yoshito Ishizaki; Naoko Yukaya; Koichi Kusuhara; Ryutaro Kira; Hiroyuki Torisu; Kenji Ihara; Yasunari Sakai; Masafumi Sanefuji; Judy R Pipo-Deveza; Catherine Lynn T Silao; Benilda C Sanchez; Marissa B Lukban; Aida M Salonga; Toshiro Hara
Journal:  Hum Genet       Date:  2010-04       Impact factor: 4.132

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