Literature DB >> 15060133

Autonomous function of the amino-terminal inhibitory domain of TAF1 in transcriptional regulation.

Shinya Takahata1, Koji Kasahara, Masashi Kawaichi, Tetsuro Kokubo.   

Abstract

The general transcription factor TFIID is composed of TATA-binding protein (TBP) and 14 TBP-associated factors (TAFs). TFIID mediates the transcriptional activation of a subset of eukaryotic promoters. The N-terminal domain (TAND) of TAF1 protein (Taf1p) inhibits TBP by binding to its concave and convex surfaces. This study examines the role of the TAND in transcriptional regulation and tests whether the TAND is an autonomous regulator of TBP. The TAND binds to and regulates TBP function when it is fused to the amino or carboxy terminus of Taf1p, the amino or carboxy terminus of Taf5p, or the amino terminus of Taf11p. However, a carboxy-terminal fusion of the TAND and Taf11p is not compatible with several other TAF proteins, including Taf1p, in the TFIID complex. These results indicate that there is no or minimal geometric constraint on the ability of the TAND to function normally in transcriptional regulation as long as TFIID assembly is secured.

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Year:  2004        PMID: 15060133      PMCID: PMC381648          DOI: 10.1128/MCB.24.8.3089-3099.2004

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  42 in total

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Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

2.  Involvement of TFIID and USA components in transcriptional activation of the human immunodeficiency virus promoter by NF-kappaB and Sp1.

Authors:  M Guermah; S Malik; R G Roeder
Journal:  Mol Cell Biol       Date:  1998-06       Impact factor: 4.272

3.  Assembly of the isomerized TFIIA--TFIID--TATA ternary complex is necessary and sufficient for gene activation.

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Journal:  Genes Dev       Date:  1996-10-15       Impact factor: 11.361

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Authors:  Y Bai; G M Perez; J M Beechem; P A Weil
Journal:  Mol Cell Biol       Date:  1997-06       Impact factor: 4.272

5.  A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II.

Authors:  Y J Kim; S Björklund; Y Li; M H Sayre; R D Kornberg
Journal:  Cell       Date:  1994-05-20       Impact factor: 41.582

6.  Assembly of recombinant TFIID reveals differential coactivator requirements for distinct transcriptional activators.

Authors:  J L Chen; L D Attardi; C P Verrijzer; K Yokomori; R Tjian
Journal:  Cell       Date:  1994-10-07       Impact factor: 41.582

7.  A mechanism for TAFs in transcriptional activation: activation domain enhancement of TFIID-TFIIA--promoter DNA complex formation.

Authors:  P M Lieberman; A J Berk
Journal:  Genes Dev       Date:  1994-05-01       Impact factor: 11.361

8.  Isolation of mouse TFIID and functional characterization of TBP and TFIID in mediating estrogen receptor and chromatin transcription.

Authors:  S Y Wu; M C Thomas; S Y Hou; V Likhite; C M Chiang
Journal:  J Biol Chem       Date:  1999-08-13       Impact factor: 5.157

9.  The yeast TAF145 inhibitory domain and TFIIA competitively bind to TATA-binding protein.

Authors:  T Kokubo; M J Swanson; J I Nishikawa; A G Hinnebusch; Y Nakatani
Journal:  Mol Cell Biol       Date:  1998-02       Impact factor: 4.272

Review 10.  Biochemistry and structural biology of transcription factor IID (TFIID).

Authors:  S K Burley; R G Roeder
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

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  7 in total

1.  The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation.

Authors:  Malika Saint; Sonal Sawhney; Ishani Sinha; Rana Pratap Singh; Rashmi Dahiya; Anushikha Thakur; Rahul Siddharthan; Krishnamurthy Natarajan
Journal:  Mol Cell Biol       Date:  2014-02-18       Impact factor: 4.272

2.  Genome-wide localization analysis of a complete set of Tafs reveals a specific effect of the taf1 mutation on Taf2 occupancy and provides indirect evidence for different TFIID conformations at different promoters.

Authors:  Kazushige Ohtsuki; Koji Kasahara; Katsuhiko Shirahige; Tetsuro Kokubo
Journal:  Nucleic Acids Res       Date:  2009-12-21       Impact factor: 16.971

3.  Identifying eIF4E-binding protein translationally-controlled transcripts reveals links to mRNAs bound by specific PUF proteins.

Authors:  Andrew G Cridge; Lydia M Castelli; Julia B Smirnova; Julian N Selley; William Rowe; Simon J Hubbard; John E G McCarthy; Mark P Ashe; Christopher M Grant; Graham D Pavitt
Journal:  Nucleic Acids Res       Date:  2010-08-12       Impact factor: 16.971

4.  A Random Screen Using a Novel Reporter Assay System Reveals a Set of Sequences That Are Preferred as the TATA or TATA-Like Elements in the CYC1 Promoter of Saccharomyces cerevisiae.

Authors:  Kiyoshi Watanabe; Makoto Yabe; Koji Kasahara; Tetsuro Kokubo
Journal:  PLoS One       Date:  2015-06-05       Impact factor: 3.240

5.  High-resolution structure of TBP with TAF1 reveals anchoring patterns in transcriptional regulation.

Authors:  Madhanagopal Anandapadamanaban; Cecilia Andresen; Sara Helander; Yoshifumi Ohyama; Marina I Siponen; Patrik Lundström; Tetsuro Kokubo; Mitsuhiko Ikura; Martin Moche; Maria Sunnerhagen
Journal:  Nat Struct Mol Biol       Date:  2013-07-14       Impact factor: 15.369

6.  SAGA mediates transcription from the TATA-like element independently of Taf1p/TFIID but dependent on core promoter structures in Saccharomyces cerevisiae.

Authors:  Kiyoshi Watanabe; Tetsuro Kokubo
Journal:  PLoS One       Date:  2017-11-27       Impact factor: 3.240

7.  Saccharomyces cerevisiae HMO1 interacts with TFIID and participates in start site selection by RNA polymerase II.

Authors:  Koji Kasahara; Sewon Ki; Kayo Aoyama; Hiroyuki Takahashi; Tetsuro Kokubo
Journal:  Nucleic Acids Res       Date:  2008-01-10       Impact factor: 16.971

  7 in total

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