Literature DB >> 15060078

NMR application probes a novel and ubiquitous family of enzymes that alter monosaccharide configuration.

Kyoung-Seok Ryu1, Changhoon Kim, Insook Kim, Seokho Yoo, Byong-Seok Choi, Chankyu Park.   

Abstract

By exploiting nuclear magnetic resonance (NMR) techniques along with novel applications of saturation difference analysis, we deciphered the functions of the previously uncharacterized products of three bacterial genes, rbsD, fucU, and yiiL, which are part of the ribose, fucose, and rhamnose operons of Escherichia coli, respectively. We show that RbsD catalyzes the pyran to furan conversion of ribose, whereas FucU and YiiL are involved in the catalysis of the anomeric conversion of their respective sugars. It was observed that the anomeric exchange of only ribofuranose, not ribopyranose, occurs spontaneously in solution rationalizing its evolutionary incorporation into the nucleic acid. The RbsD and FucU proteins share sequence homology and belong to the same protein family that is found from eubacteria to human, whereas the YiiL homologues exist in archaebacteria and lower eukaryotes. These enzymes, including the galactose mutarotase, exhibit a certain degree of cross-specificity to structurally analogous sugars thereby encompassing all existing monosaccharides in terms of their reactivities. The ubiquitous presence of enzymes involved in the anomeric changes of monosaccharides highlights an importance of these activities in various cellular processes requiring efficient monosaccharide utilization.

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Year:  2004        PMID: 15060078     DOI: 10.1074/jbc.M402016200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  11 in total

1.  Stepwise disassembly and apparent nonstepwise reassembly for the oligomeric RbsD protein.

Authors:  Yongjun Feng; Wangwang Jiao; Xinmiao Fu; Zengyi Chang
Journal:  Protein Sci       Date:  2006-06       Impact factor: 6.725

2.  Genes of Escherichia coli O157:H7 that are involved in high-pressure resistance.

Authors:  Aaron S Malone; Yoon-Kyung Chung; Ahmed E Yousef
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

3.  Ribose utilization with an excess of mutarotase causes cell death due to accumulation of methylglyoxal.

Authors:  Insook Kim; Eunjung Kim; Seokho Yoo; Daesung Shin; Bumchan Min; Jeeyeon Song; Chankyu Park
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

4.  RhaU of Rhizobium leguminosarum is a rhamnose mutarotase.

Authors:  Jason S Richardson; Xavi Carpena; Jack Switala; Rosa Perez-Luque; Lynda J Donald; Peter C Loewen; Ivan J Oresnik
Journal:  J Bacteriol       Date:  2007-12-21       Impact factor: 3.490

5.  Induction of the galactose enzymes in Escherichia coli is independent of the C-1-hydroxyl optical configuration of the inducer D-galactose.

Authors:  Sang Jun Lee; Dale E A Lewis; Sankar Adhya
Journal:  J Bacteriol       Date:  2008-10-17       Impact factor: 3.490

6.  L-fucose stimulates utilization of D-ribose by Escherichia coli MG1655 DeltafucAO and E. coli Nissle 1917 DeltafucAO mutants in the mouse intestine and in M9 minimal medium.

Authors:  Steven M Autieri; Jeremy J Lins; Mary P Leatham; David C Laux; Tyrrell Conway; Paul S Cohen
Journal:  Infect Immun       Date:  2007-08-20       Impact factor: 3.441

7.  Corrigendum: Why Quorum Sensing Controls Private Goods.

Authors:  Martin Schuster; D Joseph Sexton; Burkhard A Hense
Journal:  Front Microbiol       Date:  2017-07-24       Impact factor: 5.640

8.  Discovery and characterization of a sulfoquinovose mutarotase using kinetic analysis at equilibrium by exchange spectroscopy.

Authors:  Palika Abayakoon; James P Lingford; Yi Jin; Christopher Bengt; Gideon J Davies; Shenggen Yao; Ethan D Goddard-Borger; Spencer J Williams
Journal:  Biochem J       Date:  2018-04-16       Impact factor: 3.857

9.  The LacI-Family Transcription Factor, RbsR, Is a Pleiotropic Regulator of Motility, Virulence, Siderophore and Antibiotic Production, Gas Vesicle Morphogenesis and Flotation in Serratia.

Authors:  Chin M Lee; Rita E Monson; Rachel M Adams; George P C Salmond
Journal:  Front Microbiol       Date:  2017-09-11       Impact factor: 5.640

10.  Metabolic Traits of Bovine Shiga Toxin-Producing Escherichia Coli (STEC) Strains with Different Colonization Properties.

Authors:  Stefanie A Barth; Michael Weber; Katharina Schaufler; Christian Berens; Lutz Geue; Christian Menge
Journal:  Toxins (Basel)       Date:  2020-06-22       Impact factor: 4.546

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