Literature DB >> 15057269

Spt3 and Mot1 cooperate in nucleosome remodeling independently of TBP recruitment.

Irini Topalidou1, Manolis Papamichos-Chronakis, George Thireos, Dimitris Tzamarias.   

Abstract

We have investigated the requirements for nucleosome remodeling upon transcriptional induction of the GAL1 promoter. We found that remodeling was dependent on two SAGA complex components, Gcn5 and Spt3. The involvement of the latter was surprising as its function has been suggested to be directly involved in TATA-binding protein (TBP) recruitment. We demonstrated that this novel function was in fact independent of TBP recruitment and this was further validated using a Gal4-driven synthetic promoter. Most importantly, we showed that the involvement of Spt3 in chromatin remodeling was independent of transcription, as it was also observed for a nonpromoter nucleosome located next to an activator-binding site. In an effort to explore how the Spt3 function was elicited, we found that Mot1, an ATPase of the Snf2 family that genetically interacts with Spt3, was also required for nucleosome remodeling independently of TBP recruitment. Interestingly enough, Spt3 and Mot1 were recruited on the GAL1 promoter as well as on the nonpromoter site in an interdependent manner. These findings show that the two proteins cooperate in nucleosomal transactions.

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Year:  2004        PMID: 15057269      PMCID: PMC404319          DOI: 10.1038/sj.emboj.7600199

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  37 in total

1.  The SANT domain of Ada2 is required for normal acetylation of histones by the yeast SAGA complex.

Authors:  David E Sterner; Xun Wang; Melissa H Bloom; Gabriel M Simon; Shelley L Berger
Journal:  J Biol Chem       Date:  2002-01-02       Impact factor: 5.157

2.  Role of the Ada2 and Ada3 transcriptional coactivators in histone acetylation.

Authors:  Ramakrishnan Balasubramanian; Marilyn G Pray-Grant; William Selleck; Patrick A Grant; Song Tan
Journal:  J Biol Chem       Date:  2001-12-31       Impact factor: 5.157

Review 3.  Histone acetyltransferases.

Authors:  S Y Roth; J M Denu; C D Allis
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

4.  Post-TATA binding protein recruitment clearance of Gcn5-dependent histone acetylation within promoter nucleosomes.

Authors:  Irini Topalidou; Manolis Papamichos-Chronakis; George Thireos
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

5.  Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.

Authors:  Hans Reinke; Wolfram Hörz
Journal:  Mol Cell       Date:  2003-06       Impact factor: 17.970

6.  Mot1 activates and represses transcription by direct, ATPase-dependent mechanisms.

Authors:  Arindam Dasgupta; Russell P Darst; Karla J Martin; Cynthia A Afshari; David T Auble
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

7.  A histone fold TAF octamer within the yeast TFIID transcriptional coactivator.

Authors:  W Selleck; R Howley; Q Fang; V Podolny; M G Fried; S Buratowski; S Tan
Journal:  Nat Struct Biol       Date:  2001-08

8.  5' untranslated sequences are required for the translational control of a yeast regulatory gene.

Authors:  G Thireos; M D Penn; H Greer
Journal:  Proc Natl Acad Sci U S A       Date:  1984-08       Impact factor: 11.205

9.  The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.

Authors:  E Larschan; F Winston
Journal:  Genes Dev       Date:  2001-08-01       Impact factor: 11.361

10.  Gcn4 occupancy of open reading frame regions results in the recruitment of chromatin-modifying complexes but not the mediator complex.

Authors:  Irini Topalidou; George Thireos
Journal:  EMBO Rep       Date:  2003-09       Impact factor: 8.807

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  24 in total

1.  The Tup1 corepressor directs Htz1 deposition at a specific promoter nucleosome marking the GAL1 gene for rapid activation.

Authors:  Thomas Gligoris; George Thireos; Dimitris Tzamarias
Journal:  Mol Cell Biol       Date:  2007-03-26       Impact factor: 4.272

2.  Histone H3 phosphorylation can promote TBP recruitment through distinct promoter-specific mechanisms.

Authors:  Wan-Sheng Lo; Eric R Gamache; Karl W Henry; David Yang; Lorraine Pillus; Shelley L Berger
Journal:  EMBO J       Date:  2005-02-17       Impact factor: 11.598

3.  Snf1-dependent and Snf1-independent pathways of constitutive ADH2 expression in Saccharomyces cerevisiae.

Authors:  Valentina Voronkova; Nataly Kacherovsky; Christine Tachibana; Diana Yu; Elton T Young
Journal:  Genetics       Date:  2006-01-16       Impact factor: 4.562

4.  Helicase89B is a Mot1p/BTAF1 homologue that mediates an antimicrobial response in Drosophila.

Authors:  Yoshimasa Yagi; Y Tony Ip
Journal:  EMBO Rep       Date:  2005-09-30       Impact factor: 8.807

5.  Genetic interactions between Nhp6 and Gcn5 with Mot1 and the Ccr4-Not complex that regulate binding of TATA-binding protein in Saccharomyces cerevisiae.

Authors:  Debabrata Biswas; Yaxin Yu; Doyel Mitra; David J Stillman
Journal:  Genetics       Date:  2005-11-04       Impact factor: 4.562

6.  Differential requirement of SAGA subunits for Mot1p and Taf1p recruitment in gene activation.

Authors:  Chris J C van Oevelen; Hetty A A M van Teeffelen; H T Marc Timmers
Journal:  Mol Cell Biol       Date:  2005-06       Impact factor: 4.272

7.  TATA-binding protein variants that bypass the requirement for Mot1 in vivo.

Authors:  Rebekka O Sprouse; Melissa N Wells; David T Auble
Journal:  J Biol Chem       Date:  2008-12-21       Impact factor: 5.157

8.  Characterization of new Spt3 and TATA-binding protein mutants of Saccharomyces cerevisiae: Spt3 TBP allele-specific interactions and bypass of Spt8.

Authors:  Lisa Laprade; David Rose; Fred Winston
Journal:  Genetics       Date:  2007-12       Impact factor: 4.562

9.  Snf1p regulates Gcn5p transcriptional activity by antagonizing Spt3p.

Authors:  Yang Liu; Xinjing Xu; Min-Hao Kuo
Journal:  Genetics       Date:  2009-10-19       Impact factor: 4.562

10.  Genome-wide analysis of interactions between ATP-dependent chromatin remodeling and histone modifications.

Authors:  Zhiming Dai; Xianhua Dai; Qian Xiang; Jihua Feng; Jiang Wang; Yangyang Deng; Caisheng He
Journal:  BMC Genomics       Date:  2009-07-08       Impact factor: 3.969

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