Literature DB >> 15923605

Differential requirement of SAGA subunits for Mot1p and Taf1p recruitment in gene activation.

Chris J C van Oevelen1, Hetty A A M van Teeffelen, H T Marc Timmers.   

Abstract

Transcription activation in yeast (Saccharomyces cerevisiae) involves ordered recruitment of transcription factor complexes, such as TFIID, SAGA, and Mot1p. Previously, we showed that both Mot1p and Taf1p are recruited to the HXT2 and HXT4 genes, which encode hexose transporter proteins. Here, we show that SAGA also binds to the HXT2 and HXT4 promoters and plays a pivotal role in the recruitment of Mot1p and Taf1p. The deletion of either SPT3 or SPT8 reduces Mot1p binding to HXT2 and HXT4. Surprisingly, the deletion of GCN5 reduces Taf1p binding to both promoters. When GCN5 is deleted in spt3Delta or spt8Delta strains, neither Mot1p nor Taf1p binds, and this results in a diminished recruitment of TATA binding protein and polymerase II to the HXT4 but not the HXT2 promoter. This is reflected by the SAGA-dependent expression of HXT4. In contrast, SAGA-independent induction of HXT2 suggests a functional redundancy with other factors. A functional interplay of different SAGA subunits with Mot1p and Taf1p was supported by phenotypic analysis of MOT1 SAGA or TAF1/SAGA double mutant strains, which revealed novel genetic interactions between MOT1 and SPT8 and between TAF1 and GCN5. In conclusion, our data demonstrate functional links between SAGA, Mot1p, and TFIID in HXT gene regulation.

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Year:  2005        PMID: 15923605      PMCID: PMC1140607          DOI: 10.1128/MCB.25.12.4863-4872.2005

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  57 in total

1.  The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo.

Authors:  A M Dudley; C Rougeulle; F Winston
Journal:  Genes Dev       Date:  1999-11-15       Impact factor: 11.361

2.  The Gcn5 bromodomain co-ordinates nucleosome remodelling.

Authors:  P Syntichaki; I Topalidou; G Thireos
Journal:  Nature       Date:  2000-03-23       Impact factor: 49.962

3.  Distinct classes of yeast promoters revealed by differential TAF recruitment.

Authors:  X Y Li; S R Bhaumik; M R Green
Journal:  Science       Date:  2000-05-19       Impact factor: 47.728

4.  SAGA is an essential in vivo target of the yeast acidic activator Gal4p.

Authors:  S R Bhaumik; M R Green
Journal:  Genes Dev       Date:  2001-08-01       Impact factor: 11.361

Review 5.  The tandem affinity purification (TAP) method: a general procedure of protein complex purification.

Authors:  O Puig; F Caspary; G Rigaut; B Rutz; E Bouveret; E Bragado-Nilsson; M Wilm; B Séraphin
Journal:  Methods       Date:  2001-07       Impact factor: 3.608

6.  Mot1 activates and represses transcription by direct, ATPase-dependent mechanisms.

Authors:  Arindam Dasgupta; Russell P Darst; Karla J Martin; Cynthia A Afshari; David T Auble
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

7.  Concurrent knock-out of at least 20 transporter genes is required to block uptake of hexoses in Saccharomyces cerevisiae.

Authors:  R Wieczorke; S Krampe; T Weierstall; K Freidel; C P Hollenberg; E Boles
Journal:  FEBS Lett       Date:  1999-12-31       Impact factor: 4.124

8.  The ADA complex is a distinct histone acetyltransferase complex in Saccharomyces cerevisiae.

Authors:  A Eberharter; D E Sterner; D Schieltz; A Hassan; J R Yates; S L Berger; J L Workman
Journal:  Mol Cell Biol       Date:  1999-10       Impact factor: 4.272

9.  The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.

Authors:  E Larschan; F Winston
Journal:  Genes Dev       Date:  2001-08-01       Impact factor: 11.361

10.  Recruitment of HAT complexes by direct activator interactions with the ATM-related Tra1 subunit.

Authors:  C E Brown; L Howe; K Sousa; S C Alley; M J Carrozza; S Tan; J L Workman
Journal:  Science       Date:  2001-06-22       Impact factor: 47.728

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  17 in total

Review 1.  Multi-tasking on chromatin with the SAGA coactivator complexes.

Authors:  Jeremy A Daniel; Patrick A Grant
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

2.  Genetic interactions between Nhp6 and Gcn5 with Mot1 and the Ccr4-Not complex that regulate binding of TATA-binding protein in Saccharomyces cerevisiae.

Authors:  Debabrata Biswas; Yaxin Yu; Doyel Mitra; David J Stillman
Journal:  Genetics       Date:  2005-11-04       Impact factor: 4.562

3.  Two Distinct Regulatory Mechanisms of Transcriptional Initiation in Response to Nutrient Signaling.

Authors:  Jannatul Ferdoush; Rwik Sen; Amala Kaja; Priyanka Barman; Sukesh R Bhaumik
Journal:  Genetics       Date:  2017-11-15       Impact factor: 4.562

4.  Improvement of Lead Tolerance of Saccharomyces cerevisiae by Random Mutagenesis of Transcription Regulator SPT3.

Authors:  Liying Zhu; Shan Gao; Hongman Zhang; He Huang; Ling Jiang
Journal:  Appl Biochem Biotechnol       Date:  2017-06-27       Impact factor: 2.926

5.  Distinct promoter dynamics of the basal transcription factor TBP across the yeast genome.

Authors:  Folkert J van Werven; Hetty A A M van Teeffelen; Frank C P Holstege; H Th Marc Timmers
Journal:  Nat Struct Mol Biol       Date:  2009-09-20       Impact factor: 15.369

6.  TATA-binding protein variants that bypass the requirement for Mot1 in vivo.

Authors:  Rebekka O Sprouse; Melissa N Wells; David T Auble
Journal:  J Biol Chem       Date:  2008-12-21       Impact factor: 5.157

7.  Cooperative action of NC2 and Mot1p to regulate TATA-binding protein function across the genome.

Authors:  Folkert J van Werven; Harm van Bakel; Hetty A A M van Teeffelen; A F Maarten Altelaar; Marian Groot Koerkamp; Albert J R Heck; Frank C P Holstege; H Th Marc Timmers
Journal:  Genes Dev       Date:  2008-08-14       Impact factor: 11.361

8.  Characterization of new Spt3 and TATA-binding protein mutants of Saccharomyces cerevisiae: Spt3 TBP allele-specific interactions and bypass of Spt8.

Authors:  Lisa Laprade; David Rose; Fred Winston
Journal:  Genetics       Date:  2007-12       Impact factor: 4.562

9.  A proteomics analysis of yeast Mot1p protein-protein associations: insights into mechanism.

Authors:  Diana R Arnett; Jennifer L Jennings; David L Tabb; Andrew J Link; P Anthony Weil
Journal:  Mol Cell Proteomics       Date:  2008-07-02       Impact factor: 5.911

10.  A SAGA-independent function of SPT3 mediates transcriptional deregulation in a mutant of the Ccr4-not complex in Saccharomyces cerevisiae.

Authors:  Nicole James; Emilie Landrieux; Martine A Collart
Journal:  Genetics       Date:  2007-07-29       Impact factor: 4.562

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