Literature DB >> 15053571

Nickel oxidation states of F(430) cofactor in methyl-coenzyme M reductase.

Jennifer L Craft1, Yih-Chern Horng, Stephen W Ragsdale, Thomas C Brunold.   

Abstract

Magnetic circular dichroism (MCD) spectroscopy and variable-temperature variable-field MCD are used in combination with density functional theory (DFT) and time-dependent DFT (TD-DFT) calculations to characterize the so-called ox1-silent, red1, and ox1 forms of the Ni-containing cofactor F430 in methyl-coenzyme M reductase (MCR). Previous studies concluded that the ox1 state, which is the precursor of the key reactive red1 state of MCR, is a Ni(I) species that derives from one-electron reduction of the Ni(II)-containing ox1-silent state. However, our absorption and MCD data provide compelling evidence that ox1 is actually a Ni(II) species. In support of this proposal, our DFT and TD-DFT calculations indicate that addition of an electron to the ox1-silent state leads to formation of a hydrocorphin anion radical rather than a Ni(I) center. These results and biochemical evidence suggest that ox1 is more oxidized than red1, which prompted us to test a new model for ox1 in which the ox1-silent species is oxidized by one electron to form a thiyl radical derived from coenzyme M that couples antiferromagnetically to the Ni(II) ion. This alternative ox1 model, formally corresponding to a Ni(III)/thiolate resonance form but with predicted S = 1/2 EPR parameters reminiscent of a Ni(I) (3dx2-y2)1 species, rationalizes the requirement for reduction of ox1 to yield the red1 species and the seemingly incongruent EPR and electronic spectra of the ox1 state.

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Year:  2004        PMID: 15053571     DOI: 10.1021/ja038082p

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

1.  Observation of organometallic and radical intermediates formed during the reaction of methyl-coenzyme M reductase with bromoethanesulfonate.

Authors:  Xianghui Li; Joshua Telser; Ryan C Kunz; Brian M Hoffman; Gary Gerfen; Stephen W Ragsdale
Journal:  Biochemistry       Date:  2010-08-17       Impact factor: 3.162

2.  Temperature dependence of methyl-coenzyme M reductase activity and of the formation of the methyl-coenzyme M reductase red2 state induced by coenzyme B.

Authors:  Meike Goenrich; Evert C Duin; Felix Mahlert; Rudolf K Thauer
Journal:  J Biol Inorg Chem       Date:  2005-04-22       Impact factor: 3.358

Review 3.  Biocatalysts for methane conversion: big progress on breaking a small substrate.

Authors:  Thomas J Lawton; Amy C Rosenzweig
Journal:  Curr Opin Chem Biol       Date:  2016-10-18       Impact factor: 8.822

4.  Spectroscopic studies of the corrinoid/iron-sulfur protein from Moorella thermoacetica.

Authors:  Troy A Stich; Javier Seravalli; Swarnalatha Venkateshrao; Thomas G Spiro; Stephen W Ragsdale; Thomas C Brunold
Journal:  J Am Chem Soc       Date:  2006-04-19       Impact factor: 15.419

5.  Spectroscopic and computational studies of reduction of the metal versus the tetrapyrrole ring of coenzyme F430 from methyl-coenzyme M reductase.

Authors:  Mishtu Dey; Ryan C Kunz; Katherine M Van Heuvelen; Jennifer L Craft; Yih-Chern Horng; Qun Tang; David F Bocian; Simon J George; Thomas C Brunold; Stephen W Ragsdale
Journal:  Biochemistry       Date:  2006-10-03       Impact factor: 3.162

6.  BIOCHEMISTRY. Methane--make it or break it.

Authors:  Thomas J Lawton; Amy C Rosenzweig
Journal:  Science       Date:  2016-05-20       Impact factor: 47.728

7.  Probing the reactivity of Ni in the active site of methyl-coenzyme M reductase with substrate analogues.

Authors:  Meike Goenrich; Felix Mahlert; Evert C Duin; Carsten Bauer; Bernhard Jaun; Rudolf K Thauer
Journal:  J Biol Inorg Chem       Date:  2004-06-15       Impact factor: 3.358

8.  Characterization of alkyl-nickel adducts generated by reaction of methyl-coenzyme m reductase with brominated acids.

Authors:  Mishtu Dey; Ryan C Kunz; Derek M Lyons; Stephen W Ragsdale
Journal:  Biochemistry       Date:  2007-09-29       Impact factor: 3.162

9.  Methyl (Alkyl)-Coenzyme M Reductases: Nickel F-430-Containing Enzymes Involved in Anaerobic Methane Formation and in Anaerobic Oxidation of Methane or of Short Chain Alkanes.

Authors:  Rudolf K Thauer
Journal:  Biochemistry       Date:  2019-04-05       Impact factor: 3.162

10.  Geometric and electronic structures of the Ni(I) and methyl-Ni(III) intermediates of methyl-coenzyme M reductase.

Authors:  Ritimukta Sarangi; Mishtu Dey; Stephen W Ragsdale
Journal:  Biochemistry       Date:  2009-04-14       Impact factor: 3.162

  10 in total

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