Literature DB >> 15046583

Hyperthermophilic dehydrogenase enzymes.

J A Littlechild1, J E Guy, M N Isupov.   

Abstract

Archaeal dehydrogenases are often found to be of a specific class of dehydrogenase which has low sequence identity to the equivalent bacterial and eukaryotic counterparts. This paper focuses on two different types of hyperthermophilic dehydrogenase enzyme that have been cloned and over-expressed in Escherichia coli. The crystallographic structures of the apo form of GAPDH (glyceraldehyde-3-phosphate dehydrogenase) from Sulfolobus solfataricus and the related holo form of GAPDH from Methanothermus fervidus have been solved to high resolution. The zinc-containing structure of ADH (alcohol dehydrogenase) from Aeropyrum pernix has also been solved as a quaternary complex with the cofactor NADH and the inhibitor octanoic acid. The results show that despite the low sequence identity to the related enzymes found in other organisms the fold of the protein chain is similar. The archaeal GAPDH enzymes show a relocation of the active site which is a feature of evolutionary interest. The high thermostability of these three archaeal dehydrogenases can be attributed to a combination of factors including an increase in the number of salt bridges and hydrophobic interactions, a higher percentage of secondary structure and the presence of disulphide bonds.

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Year:  2004        PMID: 15046583     DOI: 10.1042/bst0320255

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  10 in total

1.  Heterologous expression and characterization of an alcohol dehydrogenase from the archeon Thermoplasma acidophilum.

Authors:  Erika Nahomy Marino-Marmolejo; Antonio De León-Rodríguez; Ana Paulina Barba de la Rosa; Leticia Santos
Journal:  Mol Biotechnol       Date:  2008-12-05       Impact factor: 2.695

2.  Crystal structure of AibC, a reductase involved in alternative de novo isovaleryl coenzyme A biosynthesis in Myxococcus xanthus.

Authors:  Tobias Bock; Rolf Müller; Wulf Blankenfeldt
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-07-29       Impact factor: 1.056

Review 3.  Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

Authors:  Christopher Bräsen; Dominik Esser; Bernadette Rauch; Bettina Siebers
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

4.  Structure of glyceraldehyde-3-phosphate dehydrogenase from the archaeal hyperthermophile Methanocaldococcus jannaschii.

Authors:  Ali D Malay; Yoshitaka Bessho; Mark J Ellis; Svetlana V Antonyuk; Richard W Strange; S Samar Hasnain; Akeo Shinkai; Balasundaram Padmanabhan; Shigeyuki Yokoyama
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-11-27

5.  Role of tryptophan 95 in substrate specificity and structural stability of Sulfolobus solfataricus alcohol dehydrogenase.

Authors:  Angela Pennacchio; Luciana Esposito; Adriana Zagari; Mosè Rossi; Carlo A Raia
Journal:  Extremophiles       Date:  2009-07-09       Impact factor: 2.395

6.  Widespread disulfide bonding in proteins from thermophilic archaea.

Authors:  Julien Jorda; Todd O Yeates
Journal:  Archaea       Date:  2011-09-20       Impact factor: 3.273

7.  Nucleotide sequence of Phaseolus vulgaris L. alcohol dehydrogenase encoding cDNA and three-dimensional structure prediction of the deduced protein.

Authors:  Kassim Amelia; Chin Yin Khor; Farida Habib Shah; Subhash J Bhore
Journal:  Pharmacognosy Res       Date:  2015 Apr-Jun

8.  Physicochemical characterization of a thermostable alcohol dehydrogenase from Pyrobaculum aerophilum.

Authors:  Annalisa Vitale; Natasha Thorne; Scott Lovell; Kevin P Battaile; Xin Hu; Min Shen; Sabato D'Auria; Douglas S Auld
Journal:  PLoS One       Date:  2013-06-05       Impact factor: 3.240

9.  Decarboxylation of pyruvate to acetaldehyde for ethanol production by hyperthermophiles.

Authors:  Mohammad S Eram; Kesen Ma
Journal:  Biomolecules       Date:  2013-08-21

10.  The Structure of a Novel Thermophilic Esterase from the Planctomycetes Species, Thermogutta terrifontis Reveals an Open Active Site Due to a Minimal 'Cap' Domain.

Authors:  Christopher Sayer; Zalan Szabo; Michail N Isupov; Colin Ingham; Jennifer A Littlechild
Journal:  Front Microbiol       Date:  2015-11-23       Impact factor: 5.640

  10 in total

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