Literature DB >> 15043923

Sedimentation equilibrium in a solution containing an arbitrary number of solute species at arbitrary concentrations: theory and application to concentrated solutions of ribonuclease.

Silvia Zorrilla1, Mercedes Jiménez, Pilar Lillo, Germán Rivas, Allen P Minton.   

Abstract

Simple expressions are derived describing the equilibrium concentration gradient of each species in a solution containing an arbitrary number of solute species at arbitrary concentration, as a function of the concentration of all species. Quantitative relationships between the species gradients and experimentally observable signal gradients are presented. The expressions are model-free and take into account both attractive and repulsive interactions between all species. In order to analyze data obtained from strongly nonideal solutions, a statistical thermodynamic model for repulsive solute-solute interactions is required. The relations obtained are utilized to analyze the dependence of the equilibrium gradient of ribonuclease A in phosphate-buffered saline, pH 7.4, upon total protein concentration. Experimental results are interpreted in the context of a model for weak self-association leading to the formation of significant amounts of oligomers at total protein concentrations exceeding 25 g/l.

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Year:  2004        PMID: 15043923     DOI: 10.1016/j.bpc.2003.10.012

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  17 in total

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2.  Effects of macromolecular crowding on biochemical reaction equilibria: a molecular thermodynamic perspective.

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Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

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Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

4.  Effective hard particle model for the osmotic pressure of highly concentrated binary protein solutions.

Authors:  Allen P Minton
Journal:  Biophys J       Date:  2008-01-22       Impact factor: 4.033

5.  Static light scattering from concentrated protein solutions II: experimental test of theory for protein mixtures and weakly self-associating proteins.

Authors:  Cristina Fernández; Allen P Minton
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

6.  Comparison of methods for characterizing nonideal solute self-association by sedimentation equilibrium.

Authors:  David J Scott; Donald J Winzor
Journal:  Biophys J       Date:  2009-08-05       Impact factor: 4.033

Review 7.  Macromolecular interactions of the bacterial division FtsZ protein: from quantitative biochemistry and crowding to reconstructing minimal divisomes in the test tube.

Authors:  Germán Rivas; Carlos Alfonso; Mercedes Jiménez; Begoña Monterroso; Silvia Zorrilla
Journal:  Biophys Rev       Date:  2013-04-16

8.  Hindered diffusion in polymeric solutions studied by fluorescence correlation spectroscopy.

Authors:  Silviya P Zustiak; Ralph Nossal; Dan L Sackett
Journal:  Biophys J       Date:  2011-07-06       Impact factor: 4.033

9.  Association equilibrium of the HIV-1 capsid protein in a crowded medium reveals that hexamerization during capsid assembly requires a functional C-domain dimerization interface.

Authors:  Rebeca Bocanegra; Carlos Alfonso; Alicia Rodríguez-Huete; Miguel Ángel Fuertes; Mercedes Jiménez; Germán Rivas; Mauricio G Mateu
Journal:  Biophys J       Date:  2013-02-19       Impact factor: 4.033

10.  Quantitative characterization of the concentration-dependent interaction between molecules of Dextran 70 in aqueous solution: Measurement and analysis in the context of thermodynamic and compressible sphere models.

Authors:  Cristina Fernández; Adedayo A Fodeke; Allen P Minton
Journal:  Biopolymers       Date:  2019-05-06       Impact factor: 2.505

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