Literature DB >> 15042334

Adaptive evolution of scorpion sodium channel toxins.

Shunyi Zhu1, Frank Bosmans, Jan Tytgat.   

Abstract

Gene duplication followed by positive Darwinian selection is an important evolutionary event at the molecular level, by which a gene can gain new functions. Such an event might have occurred in the evolution of scorpion sodium channel toxin genes (alpha- and beta-groups). To test this hypothesis, a robust statistical method from Yang and co-workers based on the estimation of the nonsynonymous-to-synonymous rate ratio (omega = d(N)/ d(S)) was performed. The results provide clear statistical evidence for adaptive molecular evolution of scorpion alpha- and beta-toxin genes. A good match between the positively selected sites (evolutionary epitopes) and the putative bioactive surface (functional epitopes) indicates that these sites are most likely involved in functional recognition of sodium channels. Our results also shed light on the importance of the B-loop in the functional diversification of scorpion alpha- and beta-toxins.

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Year:  2004        PMID: 15042334     DOI: 10.1007/s00239-003-2534-2

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  41 in total

1.  Mechanisms for evolving hypervariability: the case of conopeptides.

Authors:  S G Conticello; Y Gilad; N Avidan; E Ben-Asher; Z Levy; M Fainzilber
Journal:  Mol Biol Evol       Date:  2001-02       Impact factor: 16.240

2.  Codon-substitution models for heterogeneous selection pressure at amino acid sites.

Authors:  Z Yang; R Nielsen; N Goldman; A M Pedersen
Journal:  Genetics       Date:  2000-05       Impact factor: 4.562

Review 3.  Maximum likelihood methods for detecting adaptive evolution after gene duplication.

Authors:  Joseph P Bielawski; Ziheng Yang
Journal:  J Struct Funct Genomics       Date:  2003

4.  A recombinant insect-specific alpha-toxin of Buthus occitanus tunetanus scorpion confers protection against homologous mammal toxins.

Authors:  B Bouhaouala-Zahar; F Ducancel; I Zenouaki; R Ben Khalifa; L Borchani; M Pelhate; J C Boulain; M El Ayeb; A Ménez; H Karoui
Journal:  Eur J Biochem       Date:  1996-06-15

5.  Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene.

Authors:  R Nielsen; Z Yang
Journal:  Genetics       Date:  1998-03       Impact factor: 4.562

6.  Covalent structures of BmK AS and BmK AS-1, two novel bioactive polypeptides purified from Chinese scorpion Buthus martensi Karsch.

Authors:  Y H Ji; Y J Li; J W Zhang; B L Song; T Yamaki; T Mochizuki; M Hoshino; N Yanaihara
Journal:  Toxicon       Date:  1999-03       Impact factor: 3.033

7.  Nine novel precursors of Buthus martensii scorpion alpha-toxin homologues.

Authors:  S Y Zhu; W X Li; X C Zeng; H Liu; D H Jiang; X Mao
Journal:  Toxicon       Date:  2000-12       Impact factor: 3.033

8.  Positive Darwinian selection after gene duplication in primate ribonuclease genes.

Authors:  J Zhang; H F Rosenberg; M Nei
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-31       Impact factor: 11.205

9.  Accelerated evolution and molecular surface of venom phospholipase A2 enzymes.

Authors:  R M Kini; Y M Chan
Journal:  J Mol Evol       Date:  1999-02       Impact factor: 2.395

10.  Statistical methods for detecting molecular adaptation.

Authors: 
Journal:  Trends Ecol Evol       Date:  2000-12-01       Impact factor: 17.712

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  24 in total

Review 1.  Molecular mechanism of scorpion neurotoxins acting on sodium channels: insight into their diverse selectivity.

Authors:  Xiao-Pan Zuo; Yong-Hua Ji
Journal:  Mol Neurobiol       Date:  2004-12       Impact factor: 5.590

2.  The power of phylogenetic comparison in revealing protein function.

Authors:  Ziheng Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-22       Impact factor: 11.205

3.  Tarantula huwentoxin-IV inhibits neuronal sodium channels by binding to receptor site 4 and trapping the domain ii voltage sensor in the closed configuration.

Authors:  Yucheng Xiao; Jon-Paul Bingham; Weiguo Zhu; Edward Moczydlowski; Songping Liang; Theodore R Cummins
Journal:  J Biol Chem       Date:  2008-07-14       Impact factor: 5.157

Review 4.  Sea anemone toxins affecting voltage-gated sodium channels--molecular and evolutionary features.

Authors:  Yehu Moran; Dalia Gordon; Michael Gurevitz
Journal:  Toxicon       Date:  2009-03-05       Impact factor: 3.033

5.  Target promiscuity and heterogeneous effects of tarantula venom peptides affecting Na+ and K+ ion channels.

Authors:  Elisa Redaelli; Rita Restano Cassulini; Deyanira Fuentes Silva; Herlinda Clement; Emanuele Schiavon; Fernando Z Zamudio; George Odell; Annarosa Arcangeli; Jeffrey J Clare; Alejandro Alagón; Ricardo C Rodríguez de la Vega; Lourival D Possani; Enzo Wanke
Journal:  J Biol Chem       Date:  2009-12-02       Impact factor: 5.157

6.  Squeezers and leaf-cutters: differential diversification and degeneration of the venom system in toxicoferan reptiles.

Authors:  Bryan G Fry; Eivind A B Undheim; Syed A Ali; Timothy N W Jackson; Jordan Debono; Holger Scheib; Tim Ruder; David Morgenstern; Luke Cadwallader; Darryl Whitehead; Rob Nabuurs; Louise van der Weerd; Nicolas Vidal; Kim Roelants; Iwan Hendrikx; Sandy Pineda Gonzalez; Ivan Koludarov; Alun Jones; Glenn F King; Agostinho Antunes; Kartik Sunagar
Journal:  Mol Cell Proteomics       Date:  2013-04-01       Impact factor: 5.911

Review 7.  Convergent evolution of defensin sequence, structure and function.

Authors:  Thomas M A Shafee; Fung T Lay; Thanh Kha Phan; Marilyn A Anderson; Mark D Hulett
Journal:  Cell Mol Life Sci       Date:  2016-08-24       Impact factor: 9.261

8.  PosiGene: automated and easy-to-use pipeline for genome-wide detection of positively selected genes.

Authors:  Arne Sahm; Martin Bens; Matthias Platzer; Karol Szafranski
Journal:  Nucleic Acids Res       Date:  2017-06-20       Impact factor: 16.971

9.  Fusion and retrotransposition events in the evolution of the sea anemone Anemonia viridis neurotoxin genes.

Authors:  Yehu Moran; Hagar Weinberger; Nimrod Lazarus; Maya Gur; Roy Kahn; Dalia Gordon; Michael Gurevitz
Journal:  J Mol Evol       Date:  2009-07-16       Impact factor: 2.395

10.  Selective reciprocity in antimicrobial activity versus cytotoxicity of hBD-2 and crotamine.

Authors:  Nannette Y Yount; Deborah Kupferwasser; Alberto Spisni; Stephen M Dutz; Zachary H Ramjan; Shantanu Sharma; Alan J Waring; Michael R Yeaman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-13       Impact factor: 11.205

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