Literature DB >> 15037660

A conformational change in TFIIB is required for activator-mediated assembly of the preinitiation complex.

James A Glossop1, Tim R Dafforn, Stefan G E Roberts.   

Abstract

TFIIB plays a pivotal role during assembly of the RNA polymerase II transcription preinitiation complex. TFIIB is composed of two domains that engage in an intramolecular interaction that can be disrupted by the VP16 activation domain. In this study, we describe a novel human TFIIB derivative harbouring two point mutations in the highly conserved N-terminal charged cluster domain. This mutant, TFIIB R53E:R66E, exhibits an enhanced affinity in its intramolecular interaction when compared with wild-type TFIIB. Consistent with this, the mutant displays a significantly reduced affinity for VP16. However, its ability to complex with TATA-binding protein at a model promoter is equivalent to that of wild-type TFIIB. Furthermore, this TFIIB derivative is able to support high order preinitiation complex assembly in the absence of an activator. Strikingly though, an activator fails to recruit the TFIIB mutant to the promoter. Taken together, our results show that a TFIIB conformational change is critical for the formation of activator-dependent transcription complexes.

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Year:  2004        PMID: 15037660      PMCID: PMC390344          DOI: 10.1093/nar/gkh504

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  33 in total

1.  The conformation of the transcription factor TFIIB modulates the response to transcriptional activators in vivo.

Authors:  N A Hawkes; R Evans; S G Roberts
Journal:  Curr Biol       Date:  2000-03-09       Impact factor: 10.834

2.  The role of transcription factor B in transcription initiation and promoter clearance in the archaeon Sulfolobus acidocaldarius.

Authors:  S D Bell; S P Jackson
Journal:  J Biol Chem       Date:  2000-04-28       Impact factor: 5.157

3.  Activator-mediated disruption of sequence-specific DNA contacts by the general transcription factor TFIIB.

Authors:  R Evans; J A Fairley; S G Roberts
Journal:  Genes Dev       Date:  2001-11-15       Impact factor: 11.361

Review 4.  A unified theory of gene expression.

Authors:  George Orphanides; Danny Reinberg
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

Review 5.  Basal transcription factors.

Authors:  Joseph C Reese
Journal:  Curr Opin Genet Dev       Date:  2003-04       Impact factor: 5.578

6.  Core promoter-dependent TFIIB conformation and a role for TFIIB conformation in transcription start site selection.

Authors:  Jennifer A Fairley; Rachel Evans; Nicola A Hawkes; Stefan G E Roberts
Journal:  Mol Cell Biol       Date:  2002-10       Impact factor: 4.272

7.  Binding of TFIIB to RNA polymerase II: Mapping the binding site for the TFIIB zinc ribbon domain within the preinitiation complex.

Authors:  Hung-Ta Chen; Steven Hahn
Journal:  Mol Cell       Date:  2003-08       Impact factor: 17.970

8.  GAL4 derivatives function alone and synergistically with mammalian activators in vitro.

Authors:  Y S Lin; M F Carey; M Ptashne; M R Green
Journal:  Cell       Date:  1988-08-26       Impact factor: 41.582

9.  Factors involved in specific transcription by mammalian RNA polymerase II: role of transcription factors IIA, IID, and IIB during formation of a transcription-competent complex.

Authors:  E Maldonado; I Ha; P Cortes; L Weis; D Reinberg
Journal:  Mol Cell Biol       Date:  1990-12       Impact factor: 4.272

10.  Transcription factor IIB acetylates itself to regulate transcription.

Authors:  Chu H Choi; Makoto Hiromura; Anny Usheva
Journal:  Nature       Date:  2003-08-21       Impact factor: 49.962

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  12 in total

1.  TFIIB-facilitated recruitment of preinitiation complexes by a TAF-independent mechanism.

Authors:  Roderick T Hori; Shuping Xu; Xianyuan Hu; Sung Pyo
Journal:  Nucleic Acids Res       Date:  2004-07-22       Impact factor: 16.971

Review 2.  TFIIB and the regulation of transcription by RNA polymerase II.

Authors:  Wensheng Deng; Stefan G E Roberts
Journal:  Chromosoma       Date:  2007-06-26       Impact factor: 4.316

3.  TFIIB recognition elements control the TFIIA-NC2 axis in transcriptional regulation.

Authors:  Wensheng Deng; Barbora Malecová; Thomas Oelgeschläger; Stefan G E Roberts
Journal:  Mol Cell Biol       Date:  2008-12-29       Impact factor: 4.272

4.  Assembly of transcription factor IIB at a promoter in vivo requires contact with RNA polymerase II.

Authors:  Laura M Elsby; Amanda J M O'Donnell; Laura M Green; Andrew D Sharrocks; Stefan G E Roberts
Journal:  EMBO Rep       Date:  2006-07-28       Impact factor: 8.807

5.  Structural dissection of an interaction between transcription initiation and termination factors implicated in promoter-terminator cross-talk.

Authors:  Matthew Bratkowski; Ilona Christy Unarta; Lizhe Zhu; Murtada Shubbar; Xuhui Huang; Xin Liu
Journal:  J Biol Chem       Date:  2017-11-20       Impact factor: 5.157

6.  New insights into the role of TFIIB in transcription initiation.

Authors:  Yuming Wang; Stefan Ge Roberts
Journal:  Transcription       Date:  2010-07-06

7.  Phosphorylation of TFIIB links transcription initiation and termination.

Authors:  Yuming Wang; Jennifer A Fairley; Stefan G E Roberts
Journal:  Curr Biol       Date:  2010-03-11       Impact factor: 10.834

8.  A novel mitogen-activated protein kinase docking site in the N terminus of MEK5alpha organizes the components of the extracellular signal-regulated kinase 5 signaling pathway.

Authors:  Jan Seyfried; Xin Wang; Giorgi Kharebava; Cathy Tournier
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

9.  Dynamic interaction between WT1 and BASP1 in transcriptional regulation during differentiation.

Authors:  Laura M Green; Kate J Wagner; Hayley A Campbell; Kelly Addison; Stefan G E Roberts
Journal:  Nucleic Acids Res       Date:  2008-12-02       Impact factor: 16.971

10.  The transcription factor GATA1 and the histone methyltransferase SET7 interact to promote VEGF-mediated angiogenesis and tumor growth and predict clinical outcome of breast cancer.

Authors:  Yanan Zhang; Jie Liu; Jing Lin; Lei Zhou; Yuhua Song; Bo Wei; Xiaoli Luo; Zhida Chen; Yingjie Chen; Jiaxiu Xiong; Xiaojie Xu; Lihua Ding; Qinong Ye
Journal:  Oncotarget       Date:  2016-03-01
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