Literature DB >> 15032553

ESP: a method to predict toxicity and pharmacological properties of chemicals using multiple MCASE databases.

Gilles Klopman1, Suman K Chakravarti, Hao Zhu, Julian M Ivanov, Roustem D Saiakhov.   

Abstract

We describe here the development of a computer program which uses a new method called Expert System Prediction (ESP), to predict toxic end points and pharmacological properties of chemicals based on multiple modules created by the MCASE artificial intelligence system. The modules are generally based on different biological models measuring related end points. The purpose is to improve the decision making process regarding the overall activity or inactivity of the chemicals and also to enable rapid in silico screening. ESP evaluates the significance of the biophores from a different viewpoint and uses this information for predicting the activity of new chemicals. We have used a unique encoding system to represent relevant features of a chemical in the form of a pattern vector and a genetic artificial neural network (GA-ANN) to gain knowledge of the relationship between these patterns and the overall pharmacological property. The effectiveness of ESP is illustrated in the prediction of general carcinogenicity of a diverse set of chemicals using MCASE male/female rats and mice carcinogenicity modules.

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Year:  2004        PMID: 15032553     DOI: 10.1021/ci030298n

Source DB:  PubMed          Journal:  J Chem Inf Comput Sci        ISSN: 0095-2338


  5 in total

1.  Quantitative and qualitative models for carcinogenicity prediction for non-congeneric chemicals using CP ANN method for regulatory uses.

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Journal:  Mol Divers       Date:  2009-08-15       Impact factor: 2.943

Review 2.  Development of Anticancer Peptides Using Artificial Intelligence and Combinational Therapy for Cancer Therapeutics.

Authors:  Ji Su Hwang; Seok Gi Kim; Tae Hwan Shin; Yong Eun Jang; Do Hyeon Kwon; Gwang Lee
Journal:  Pharmaceutics       Date:  2022-05-06       Impact factor: 6.525

3.  New public QSAR model for carcinogenicity.

Authors:  Natalja Fjodorova; Marjan Vracko; Marjana Novic; Alessandra Roncaglioni; Emilio Benfenati
Journal:  Chem Cent J       Date:  2010-07-29       Impact factor: 4.215

4.  Weighted feature significance: a simple, interpretable model of compound toxicity based on the statistical enrichment of structural features.

Authors:  Ruili Huang; Noel Southall; Menghang Xia; Ming-Hsuang Cho; Ajit Jadhav; Dac-Trung Nguyen; James Inglese; Raymond R Tice; Christopher P Austin
Journal:  Toxicol Sci       Date:  2009-10-04       Impact factor: 4.849

Review 5.  Automated detection of structural alerts (chemical fragments) in (eco)toxicology.

Authors:  Alban Lepailleur; Guillaume Poezevara; Ronan Bureau
Journal:  Comput Struct Biotechnol J       Date:  2013-04-06       Impact factor: 7.271

  5 in total

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