Literature DB >> 15023957

Gillisia limnaea gen. nov., sp. nov., a new member of the family Flavobacteriaceae isolated from a microbial mat in Lake Fryxell, Antarctica.

Stefanie Van Trappen1, Ilse Vandecandelaere1, Joris Mergaert1, Jean Swings1.   

Abstract

A taxonomic study was performed on three strains isolated from microbial mats in Lake Fryxell, McMurdo Dry Valleys, Antarctica. Phylogenetic analysis based on 16S rRNA gene sequences indicated that these strains belong to the family Flavobacteriaceae, in which they form a distinct lineage. The isolates are Gram-negative, chemoheterotrophic, aerobic, rod-shaped cells. They are psychrophilic and yellow-pigmented, with DNA G+C contents in the range 37.8-38.9 mol%. Whole-cell fatty acid profiles revealed mainly branched fatty acids and 17 : 0 2-OH. On the basis of genotypic, phenotypic, chemotaxonomic and phylogenetic results, it is proposed that the isolates represent a novel species in a new genus, Gillisia limnaea gen. nov., sp. nov. The type strain is LMG 21470(T) (=DSM 15749(T)).

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Year:  2004        PMID： 15023957     DOI： 10.1099/ijs.0.02922-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN： 1466-5026            Impact factor:   2.747


  13 in total

1.  Cultivable bacteria from ancient algal mats from the McMurdo Dry Valleys, Antarctica.

Authors:  Doug E Antibus; Laura G Leff; Brenda L Hall; Jenny L Baeseman; Christopher B Blackwood
Journal:  Extremophiles       Date:  2011-11-08       Impact factor: 2.395

2.  Isolation, characterization, and ecology of cold-active, chemolithotrophic, sulfur-oxidizing bacteria from perennially ice-covered Lake Fryxell, Antarctica.

Authors:  W Matthew Sattley; Michael T Madigan
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

3.  Cold-active chemoorganotrophic bacteria from permanently ice-covered Lake Hoare, McMurdo Dry Valleys, Antarctica.

Authors:  Kate M Clocksin; Deborah O Jung; Michael T Madigan
Journal:  Appl Environ Microbiol       Date:  2007-03-16       Impact factor: 4.792

4.  Functional characterization of flavobacteria rhodopsins reveals a unique class of light-driven chloride pump in bacteria.

Authors:  Susumu Yoshizawa; Yohei Kumagai; Hana Kim; Yoshitoshi Ogura; Tetsuya Hayashi; Wataru Iwasaki; Edward F DeLong; Kazuhiro Kogure
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-31       Impact factor: 11.205

5.  Draft genome sequence of Gillisia sp. strain CBA3202, a novel member of the genus Gillisia, which belongs to the family Flavobacteriaceae.

Authors:  Young-Do Nam; Hae-Won Lee; Myunglip Lee; Kyung June Yim; Kil-Nam Kim; Seong Woon Roh; Daekyung Kim
Journal:  J Bacteriol       Date:  2012-07       Impact factor: 3.490

6.  Antarcticimonas flava gen. nov., sp. nov., isolated from Antarctic coastal seawater.

Authors:  Seung-Jo Yang; Hyun-Myung Oh; Sangyun Chung; Jang-Cheon Cho
Journal:  J Microbiol       Date:  2009-10-24       Impact factor: 3.422

7.  Genomic makeup of the marine flavobacterium Nonlabens (Donghaeana) dokdonensis and identification of a novel class of rhodopsins.

Authors:  Soon-Kyeong Kwon; Byung Kwon Kim; Ju Yeon Song; Min-Jung Kwak; Choong Hoon Lee; Jung-Hoon Yoon; Tae Kwang Oh; Jihyun F Kim
Journal:  Genome Biol Evol       Date:  2013       Impact factor: 3.416

8.  Microbial community composition of transiently wetted Antarctic Dry Valley soils.

Authors:  Thomas D Niederberger; Jill A Sohm; Troy E Gunderson; Alexander E Parker; Joëlle Tirindelli; Douglas G Capone; Edward J Carpenter; Stephen C Cary
Journal:  Front Microbiol       Date:  2015-01-28       Impact factor: 5.640

9.  Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)).

Authors:  Thomas Riedel; Brittany Held; Matt Nolan; Susan Lucas; Alla Lapidus; Hope Tice; Tijana Glavina Del Rio; Jan-Fang Cheng; Cliff Han; Roxanne Tapia; Lynne A Goodwin; Sam Pitluck; Konstantinos Liolios; Konstantinos Mavromatis; Ioanna Pagani; Natalia Ivanova; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Manfred Rohde; Brian J Tindall; John C Detter; Markus Göker; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Tanja Woyke
Journal:  Stand Genomic Sci       Date:  2012-10-10

10.  Genomics and physiology of a marine flavobacterium encoding a proteorhodopsin and a xanthorhodopsin-like protein.

Authors:  Thomas Riedel; Laura Gómez-Consarnau; Jürgen Tomasch; Madeleine Martin; Michael Jarek; José M González; Stefan Spring; Meike Rohlfs; Thorsten Brinkhoff; Heribert Cypionka; Markus Göker; Anne Fiebig; Johannes Klein; Alexander Goesmann; Jed A Fuhrman; Irene Wagner-Döbler
Journal:  PLoS One       Date:  2013-03-04       Impact factor: 3.240
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