Literature DB >> 15023059

Crystal structure of the alkylsulfatase AtsK: insights into the catalytic mechanism of the Fe(II) alpha-ketoglutarate-dependent dioxygenase superfamily.

Ilka Müller1, Antje Kahnert, Thomas Pape, George M Sheldrick, Wolfram Meyer-Klaucke, Thomas Dierks, Michael Kertesz, Isabel Usón.   

Abstract

The alkylsulfatase AtsK from Pseudomonas putida S-313 belongs to the widespread and versatile non-heme iron(II) alpha-ketoglutarate-dependent dioxygenase superfamily and catalyzes the oxygenolytic cleavage of a variety of different alkyl sulfate esters to the corresponding aldehyde and sulfate. The enzyme is only expressed under sulfur starvation conditions, providing a selective advantage for bacterial growth in soils and rhizosphere. Here we describe the crystal structure of AtsK in the apo form and in three complexes: with the cosubstrate alpha-ketoglutarate, with alpha-ketoglutarate and iron, and finally with alpha-ketoglutarate, iron, and an alkyl sulfate ester used as substrate in catalytic studies. The overall fold of the enzyme is closely related to that of the taurine/alpha-ketoglutarate dioxygenase TauD and is similar to the fold observed for other members of the enzyme superfamily. From comparison of these structures with the crystal structure of AtsK and its complexes, we propose a general mechanism for the catalytic cycle of the alpha-ketoglutarate-dependent dioxygenase superfamily.

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Year:  2004        PMID: 15023059     DOI: 10.1021/bi035752v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  38 in total

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2.  Structural and functional analysis show that the Escherichia coli uncharacterized protein YjcS is likely an alkylsulfatase.

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3.  Evidence that oxidative dephosphorylation by the nonheme Fe(II), α-ketoglutarate:UMP oxygenase occurs by stereospecific hydroxylation.

Authors:  Anwesha Goswami; Xiaodong Liu; Wenlong Cai; Thomas P Wyche; Tim S Bugni; Maïa Meurillon; Suzanne Peyrottes; Christian Perigaud; Koichi Nonaka; Jürgen Rohr; Steven G Van Lanen
Journal:  FEBS Lett       Date:  2017-01-25       Impact factor: 4.124

4.  Structural basis for the enantiospecificities of R- and S-specific phenoxypropionate/alpha-ketoglutarate dioxygenases.

Authors:  Tina A Müller; Maria I Zavodszky; Michael Feig; Leslie A Kuhn; Robert P Hausinger
Journal:  Protein Sci       Date:  2006-06       Impact factor: 6.725

5.  The crystal structure of SdsA1, an alkylsulfatase from Pseudomonas aeruginosa, defines a third class of sulfatases.

Authors:  Gregor Hagelueken; Thorsten M Adams; Lutz Wiehlmann; Ute Widow; Harald Kolmar; Burkhard Tümmler; Dirk W Heinz; Wolf-Dieter Schubert
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-09       Impact factor: 11.205

6.  Inverse solvent isotope effects demonstrate slow aquo release from hypoxia inducible factor-prolyl hydroxylase (PHD2).

Authors:  Shannon C Flagg; Nitai Giri; Serap Pektas; Michael J Maroney; Michael J Knapp
Journal:  Biochemistry       Date:  2012-08-09       Impact factor: 3.162

7.  The eukaryotic enzyme Bds1 is an alkyl but not an aryl sulfohydrolase.

Authors:  Grace L Waddell; Caroline R Gilmer; Nicholas G Taylor; John Randolf S Reveral; Marcello Forconi; Jennifer L Fox
Journal:  Biochem Biophys Res Commun       Date:  2017-07-15       Impact factor: 3.575

Review 8.  Imposing function down a (cupin)-barrel: secondary structure and metal stereochemistry in the αKG-dependent oxygenases.

Authors:  John A Hangasky; Cornelius Y Taabazuing; Meaghan A Valliere; Michael J Knapp
Journal:  Metallomics       Date:  2013-04       Impact factor: 4.526

9.  Structural basis for the erythro-stereospecificity of the L-arginine oxygenase VioC in viomycin biosynthesis.

Authors:  Verena Helmetag; Stefan A Samel; Michael G Thomas; Mohamed A Marahiel; Lars-Oliver Essen
Journal:  FEBS J       Date:  2009-05-26       Impact factor: 5.542

10.  Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex.

Authors:  Hyoun Sook Kim; Hye Lee Kim; Kyoung Hoon Kim; Do Jin Kim; Sang Jae Lee; Ji Young Yoon; Hye Jin Yoon; Hyang Yeon Lee; Seung Bum Park; Soon-Jong Kim; Jae Young Lee; Se Won Suh
Journal:  Nucleic Acids Res       Date:  2009-12-29       Impact factor: 16.971

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