Literature DB >> 15020046

Nucleosome remodeling: one mechanism, many phenomena?

Gernot Längst1, Peter B Becker.   

Abstract

The term 'nucleosome remodeling' subsumes a large number of energy-dependent alterations of canonical nucleosome structure, catalyzed by dedicated ATPases in large multiprotein complexes. The importance of these factors for gene regulation and other processes with chromatin substrate have emerged from genetic studies. Mechanistic analyses of nucleosome remodeling by different enzymes provided a diverse, almost confusing phenomenology of ATP-dependent derangement of nucleosomes in vitro, suggesting that different remodeling machines follow different strategies to disrupt histone-DNA interactions. This review explores the alternative possibility that the rich phenomenology of nucleosome remodeling may be brought about by variations of one basic remodeling reaction.

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Year:  2004        PMID: 15020046     DOI: 10.1016/j.bbaexp.2003.10.011

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  49 in total

1.  Evidence for histone eviction in trans upon induction of the yeast PHO5 promoter.

Authors:  Philipp Korber; Tim Luckenbach; Dorothea Blaschke; Wolfram Hörz
Journal:  Mol Cell Biol       Date:  2004-12       Impact factor: 4.272

2.  Two distinct mechanisms of chromatin interaction by the Isw2 chromatin remodeling complex in vivo.

Authors:  Thomas G Fazzio; Marnie E Gelbart; Toshio Tsukiyama
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

3.  Dynamics of initiation, termination and reinitiation of DNA translocation by the motor protein EcoR124I.

Authors:  Ralf Seidel; Joost G P Bloom; John van Noort; Christina F Dutta; Nynke H Dekker; Keith Firman; Mark D Szczelkun; Cees Dekker
Journal:  EMBO J       Date:  2005-11-17       Impact factor: 11.598

4.  The histone fold subunits of Drosophila CHRAC facilitate nucleosome sliding through dynamic DNA interactions.

Authors:  Klaus F Hartlepp; Carlos Fernández-Tornero; Anton Eberharter; Tim Grüne; Christoph W Müller; Peter B Becker
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

5.  Chromatin-dependent cooperativity between site-specific transcription factors in vivo.

Authors:  Pratibha B Hebbar; Trevor K Archer
Journal:  J Biol Chem       Date:  2006-12-23       Impact factor: 5.157

6.  Lsh is involved in de novo methylation of DNA.

Authors:  Heming Zhu; Theresa M Geiman; Sichuan Xi; Qiong Jiang; Anja Schmidtmann; Taiping Chen; En Li; Kathrin Muegge
Journal:  EMBO J       Date:  2006-01-05       Impact factor: 11.598

7.  Activation domains drive nucleosome eviction by SWI/SNF.

Authors:  José L Gutiérrez; Mark Chandy; Michael J Carrozza; Jerry L Workman
Journal:  EMBO J       Date:  2007-01-18       Impact factor: 11.598

Review 8.  INO80 subfamily of chromatin remodeling complexes.

Authors:  Yunhe Bao; Xuetong Shen
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

9.  Conformational changes and catalytic inefficiency associated with Mot1-mediated TBP-DNA dissociation.

Authors:  Gregor Heiss; Evelyn Ploetz; Lena Voith von Voithenberg; Ramya Viswanathan; Samson Glaser; Peter Schluesche; Sushi Madhira; Michael Meisterernst; David T Auble; Don C Lamb
Journal:  Nucleic Acids Res       Date:  2019-04-08       Impact factor: 16.971

10.  Solution AFM studies of human Swi-Snf and its interactions with MMTV DNA and chromatin.

Authors:  H Wang; R Bash; S M Lindsay; D Lohr
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

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