Literature DB >> 15005611

NO binding induced conformational changes in a truncated hemoglobin from Mycobacterium tuberculosis.

Masahiro Mukai1, Yannick Ouellet, Hugues Ouellet, Michel Guertin, Syun-Ru Yeh.   

Abstract

The resonance Raman spectra of the NO-bound ferric derivatives of wild-type HbN and the B10 Tyr --> Phe mutant of HbN, a hemoglobin from Mycobacterium tuberculosis, were examined with both Soret and UV excitation. The Fe-N-O stretching and bending modes of the NO derivative of the wild-type protein were tentatively assigned at 591 and 579 cm(-1), respectively. Upon B10 mutation, the Fe-NO stretching mode was slightly enhanced and the bending mode diminished in amplitude. In addition, the N-O stretching mode shifted from 1914 to 1908 cm(-1). These data suggest that the B10 Tyr forms an H-bond(s) with the heme-bound NO and causes it to bend in the wild-type protein. To further investigate the interaction between the B10 Tyr and the heme-bound NO, we examined the UV Raman spectrum of the B10 Tyr by subtracting the B10 mutant spectrum from the wild-type spectrum. It was found that, upon NO binding to the ferric protein, the Y(8a) mode of the B10 Tyr shifted from 1616 to 1622 cm(-1), confirming a direct interaction between the B10 Tyr and the heme-bound NO. Furthermore, the Y(8a) mode of the other two Tyr residues at positions 16 and 72 that are remote from the heme was also affected by NO binding, suggesting that NO binding to the distal site of the heme triggers a large-scale conformational change that propagates through the pre-F helix loop to the E and B helices. This large-scale conformational change triggered by NO binding may play an important role in regulating the ligand binding properties and/or the chemical reactivity of HbN.

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Year:  2004        PMID: 15005611     DOI: 10.1021/bi035798o

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

Review 1.  Spectroscopic characterization of heme iron-nitrosyl species and their role in NO reductase mechanisms in diiron proteins.

Authors:  Pierre Moënne-Loccoz
Journal:  Nat Prod Rep       Date:  2007-03-23       Impact factor: 13.423

2.  Purification and spectroscopic characterization of Ctb, a group III truncated hemoglobin implicated in oxygen metabolism in the food-borne pathogen Campylobacter jejuni.

Authors:  Laura M Wainwright; Yinghua Wang; Simon F Park; Syun-Ru Yeh; Robert K Poole
Journal:  Biochemistry       Date:  2006-05-16       Impact factor: 3.162

3.  New light on NO bonding in Fe(III) heme proteins from resonance Raman spectroscopy and DFT modeling.

Authors:  Alexandra V Soldatova; Mohammed Ibrahim; John S Olson; Roman S Czernuszewicz; Thomas G Spiro
Journal:  J Am Chem Soc       Date:  2010-04-07       Impact factor: 15.419

4.  Nitric oxide dioxygenation reaction in DevS and the initial response to nitric oxide in Mycobacterium tuberculosis.

Authors:  Erik T Yukl; Alexandra Ioanoviciu; Santhosh Sivaramakrishnan; Michiko M Nakano; Paul R Ortiz de Montellano; Pierre Moënne-Loccoz
Journal:  Biochemistry       Date:  2011-01-20       Impact factor: 3.162

Review 5.  How do heme-protein sensors exclude oxygen? Lessons learned from cytochrome c', Nostoc puntiforme heme nitric oxide/oxygen-binding domain, and soluble guanylyl cyclase.

Authors:  Ah-Lim Tsai; Emil Martin; Vladimir Berka; John S Olson
Journal:  Antioxid Redox Signal       Date:  2012-04-10       Impact factor: 8.401

6.  Nitric oxide dynamics in truncated hemoglobin: docking sites, migration pathways, and vibrational spectroscopy from molecular dynamics simulations.

Authors:  Sabyashachi Mishra; Markus Meuwly
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

7.  CO, NO and O2 as Vibrational Probes of Heme Protein Interactions.

Authors:  Thomas G Spiro; Alexandra V Soldatova; Gurusamy Balakrishnan
Journal:  Coord Chem Rev       Date:  2012-06-06       Impact factor: 22.315

8.  Role of PheE15 gate in ligand entry and nitric oxide detoxification function of mycobacterium tuberculosis truncated hemoglobin N.

Authors:  Ana Oliveira; Sandeep Singh; Axel Bidon-Chanal; Flavio Forti; Marcelo A Martí; Leonardo Boechi; Dario A Estrin; Kanak L Dikshit; F Javier Luque
Journal:  PLoS One       Date:  2012-11-08       Impact factor: 3.240

9.  Structure and reactivity of chlorite dismutase nitrosyls.

Authors:  Zachary Geeraerts; Alisa K Heskin; Jennifer DuBois; Kenton R Rodgers; Gudrun S Lukat-Rodgers
Journal:  J Inorg Biochem       Date:  2020-07-26       Impact factor: 4.155

  9 in total

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