Literature DB >> 15003209

Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs).

Ning Jiang1, Cédric Feschotte, Xiaoyu Zhang, Susan R Wessler.   

Abstract

Recent studies of rice miniature inverted repeat transposable elements (MITEs), largely fueled by the availability of genomic sequence, have provided answers to many of the outstanding questions regarding the existence of active MITEs, their source of transposases (TPases) and their chromosomal distribution. Although many questions remain about MITE origins and mode of amplification, data accumulated over the past two years have led to the formulation of testable models.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15003209     DOI: 10.1016/j.pbi.2004.01.004

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  78 in total

1.  Analysis of copy-number variation, insertional polymorphism, and methylation status of the tiniest class I (TRIM) and class II (MITE) transposable element families in various rice strains.

Authors:  Omer Baruch; Khalil Kashkush
Journal:  Plant Cell Rep       Date:  2011-12-20       Impact factor: 4.570

2.  Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution.

Authors:  Beery Yaakov; Elif Ceylan; Katherine Domb; Khalil Kashkush
Journal:  Theor Appl Genet       Date:  2012-05       Impact factor: 5.699

3.  MuDR transposase increases the frequency of meiotic crossovers in the vicinity of a Mu insertion in the maize a1 gene.

Authors:  Marna D Yandeau-Nelson; Qing Zhou; Hong Yao; Xiaojie Xu; Basil J Nikolau; Patrick S Schnable
Journal:  Genetics       Date:  2004-10-16       Impact factor: 4.562

4.  Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium.

Authors:  Jennifer S Hawkins; HyeRan Kim; John D Nason; Rod A Wing; Jonathan F Wendel
Journal:  Genome Res       Date:  2006-09-05       Impact factor: 9.043

5.  Analysis of genes associated with retrotransposons in the rice genome.

Authors:  Nicholas Krom; Jill Recla; Wusirika Ramakrishna
Journal:  Genetica       Date:  2007-12-09       Impact factor: 1.082

6.  Active miniature transposons from a plant genome and its nonrecombining Y chromosome.

Authors:  R Bergero; A Forrest; D Charlesworth
Journal:  Genetics       Date:  2008-02-01       Impact factor: 4.562

Review 7.  DNA transposons and the evolution of eukaryotic genomes.

Authors:  Cédric Feschotte; Ellen J Pritham
Journal:  Annu Rev Genet       Date:  2007       Impact factor: 16.830

8.  Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice.

Authors:  Liya Wei; Lianfeng Gu; Xianwei Song; Xiekui Cui; Zhike Lu; Ming Zhou; Lulu Wang; Fengyi Hu; Jixian Zhai; Blake C Meyers; Xiaofeng Cao
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-19       Impact factor: 11.205

9.  Transposable element-associated microRNA hairpins produce 21-nt sRNAs integrated into typical microRNA pathways in rice.

Authors:  Fangqian Ou-Yang; Qing-Jun Luo; Yue Zhang; Casey R Richardson; Yingwen Jiang; Christopher D Rock
Journal:  Funct Integr Genomics       Date:  2013-02-19       Impact factor: 3.410

10.  Functional characterization of piggyBat from the bat Myotis lucifugus unveils an active mammalian DNA transposon.

Authors:  Rupak Mitra; Xianghong Li; Aurélie Kapusta; David Mayhew; Robi D Mitra; Cédric Feschotte; Nancy L Craig
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-17       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.