Literature DB >> 14983021

Genetic and functional confirmation of the causality of the DGAT1 K232A quantitative trait nucleotide in affecting milk yield and composition.

Bernard Grisart1, Frédéric Farnir, Latifa Karim, Nadine Cambisano, Jong-Joo Kim, Alex Kvasz, Myriam Mni, Patricia Simon, Jean-Marie Frère, Wouter Coppieters, Michel Georges.   

Abstract

We recently used a positional cloning approach to identify a nonconservative lysine to alanine substitution (K232A) in the bovine DGAT1 gene that was proposed to be the causative quantitative trait nucleotide underlying a quantitative trait locus (QTL) affecting milk fat composition, previously mapped to the centromeric end of bovine chromosome 14. We herein generate genetic and functional data that confirm the causality of the DGAT1 K232A mutation. We have constructed a high-density single-nucleotide polymorphism map of the 3.8-centimorgan BULGE30-BULGE9 interval containing the QTL and show that the association with milk fat percentage maximizes at the DGAT1 gene. We provide evidence that the K allele has undergone a selective sweep. By using a baculovirus expression system, we have expressed both DGAT1 alleles in Sf9 cells and show that the K allele, causing an increase in milk fat percentage in the live animal, is characterized by a higher Vmax in producing triglycerides than the A allele.

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Year:  2004        PMID: 14983021      PMCID: PMC356962          DOI: 10.1073/pnas.0308518100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

1.  Extensive genome-wide linkage disequilibrium in cattle.

Authors:  F Farnir; W Coppieters; J J Arranz; P Berzi; N Cambisano; B Grisart; L Karim; F Marcq; L Moreau; M Mni; C Nezer; P Simon; P Vanmanshoven; D Wagenaar; M Georges
Journal:  Genome Res       Date:  2000-02       Impact factor: 9.043

2.  Simultaneous mining of linkage and linkage disequilibrium to fine map quantitative trait loci in outbred half-sib pedigrees: revisiting the location of a quantitative trait locus with major effect on milk production on bovine chromosome 14.

Authors:  Frédéric Farnir; Bernard Grisart; Wouter Coppieters; Juliette Riquet; Paulette Berzi; Nadine Cambisano; Latifa Karim; Myriam Mni; Sirja Moisio; Patricia Simon; Danny Wagenaar; Johanna Vilkki; Michel Georges
Journal:  Genetics       Date:  2002-05       Impact factor: 4.562

3.  A genome scan for QTL influencing milk production and health traits in dairy cattle.

Authors:  D W Heyen; J I Weller; M Ron; M Band; J E Beever; E Feldmesser; Y Da; G R Wiggans; P M VanRaden; H A Lewin
Journal:  Physiol Genomics       Date:  1999-11-11       Impact factor: 3.107

4.  Association of a lysine-232/alanine polymorphism in a bovine gene encoding acyl-CoA:diacylglycerol acyltransferase (DGAT1) with variation at a quantitative trait locus for milk fat content.

Authors:  Andreas Winter; Wolfgang Krämer; Fabian A O Werner; Sonja Kollers; Srinivas Kata; Gregor Durstewitz; Johannes Buitkamp; James E Womack; Georg Thaller; Ruedi Fries
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-20       Impact factor: 11.205

5.  Detecting recent positive selection in the human genome from haplotype structure.

Authors:  Pardis C Sabeti; David E Reich; John M Higgins; Haninah Z P Levine; Daniel J Richter; Stephen F Schaffner; Stacey B Gabriel; Jill V Platko; Nick J Patterson; Gavin J McDonald; Hans C Ackerman; Sarah J Campbell; David Altshuler; Richard Cooper; Dominic Kwiatkowski; Ryk Ward; Eric S Lander
Journal:  Nature       Date:  2002-10-09       Impact factor: 49.962

6.  Positional candidate cloning of a QTL in dairy cattle: identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition.

Authors:  Bernard Grisart; Wouter Coppieters; Frédéric Farnir; Latifa Karim; Christine Ford; Paulette Berzi; Nadine Cambisano; Myriam Mni; Suzanne Reid; Patricia Simon; Richard Spelman; Michel Georges; Russell Snell
Journal:  Genome Res       Date:  2002-02       Impact factor: 9.043

7.  A mammary gland EST showing linkage disequilibrium to a milk production QTL on bovine Chromosome 14.

Authors:  C Looft; N Reinsch; C Karall-Albrecht; S Paul; M Brink; H Thomsen; G Brockmann; C Kühn; M Schwerin; E Kalm
Journal:  Mamm Genome       Date:  2001-08       Impact factor: 2.957

8.  Fine-mapping of quantitative trait loci by identity by descent in outbred populations: application to milk production in dairy cattle.

Authors:  J Riquet; W Coppieters; N Cambisano; J J Arranz; P Berzi; S K Davis; B Grisart; F Farnir; L Karim; M Mni; P Simon; J F Taylor; P Vanmanshoven; D Wagenaar; J E Womack; M Georges
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

9.  Human acyl-CoA:diacylglycerol acyltransferase is a tetrameric protein.

Authors:  D Cheng; R L Meegalla; B He; D A Cromley; J T Billheimer; P R Young
Journal:  Biochem J       Date:  2001-11-01       Impact factor: 3.857

10.  Convenient genotyping of six myostatin mutations causing double-muscling in cattle using a multiplex oligonucleotide ligation assay.

Authors:  L Karim; W Coppieters; L Grobet; A Valentini; M Georges
Journal:  Anim Genet       Date:  2000-12       Impact factor: 3.169

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  125 in total

1.  Genetic variances of SNP loci for milk yield in dairy cattle.

Authors:  Petr Pešek; Josef Přibyl; Luboš Vostrý
Journal:  J Appl Genet       Date:  2014-11-16       Impact factor: 3.240

2.  The impact of genetic architecture on genome-wide evaluation methods.

Authors:  Hans D Daetwyler; Ricardo Pong-Wong; Beatriz Villanueva; John A Woolliams
Journal:  Genetics       Date:  2010-04-20       Impact factor: 4.562

3.  Identification and characterization of regions of the rice genome associated with broad-spectrum, quantitative disease resistance.

Authors:  Randall J Wisser; Qi Sun; Scot H Hulbert; Stephen Kresovich; Rebecca J Nelson
Journal:  Genetics       Date:  2005-02-16       Impact factor: 4.562

4.  Identification of a 1.1-Mb region for a carcass weight QTL onbovine Chromosome 14.

Authors:  Kazunori Mizoshita; Atsushi Takano; Toshio Watanabe; Akiko Takasuga; Yoshikazu Sugimoto
Journal:  Mamm Genome       Date:  2005-07       Impact factor: 2.957

5.  The number of loci that affect milk production traits in dairy cattle.

Authors:  Amanda Jane Chamberlain; Helen Clare McPartlan; Michael Edward Goddard
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

6.  Genetic and haplotypic structure in 14 European and African cattle breeds.

Authors:  Mathieu Gautier; Thomas Faraut; Katayoun Moazami-Goudarzi; Vincent Navratil; Mario Foglio; Cécile Grohs; Anne Boland; Jean-Guillaume Garnier; Didier Boichard; G Mark Lathrop; Ivo G Gut; André Eggen
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

7.  Simulation of DNA sequence evolution under models of recent directional selection.

Authors:  Yuseob Kim; Thomas Wiehe
Journal:  Brief Bioinform       Date:  2008-12-24       Impact factor: 11.622

8.  A hidden markov model combining linkage and linkage disequilibrium information for haplotype reconstruction and quantitative trait locus fine mapping.

Authors:  Tom Druet; Michel Georges
Journal:  Genetics       Date:  2009-12-14       Impact factor: 4.562

Review 9.  A critical analysis of production-associated DNA polymorphisms in the genes of cattle, goat, sheep, and pig.

Authors:  Eveline M Ibeagha-Awemu; Patrick Kgwatalala; Xin Zhao
Journal:  Mamm Genome       Date:  2008-10-04       Impact factor: 2.957

10.  RNA interference-mediated knockdown of DGAT1 decreases triglyceride content of bovine mammary epithelial cell line.

Authors:  Chunyan Lu; Runjun Yang; Binglei Shen; Hassan Osman; Yonghong Zhang; Shouqing Yan; Liying Zhang; Zhihui Zhao
Journal:  Gene Expr       Date:  2012
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