Literature DB >> 1497626

Stability of Arthrobacter D-xylose isomerase to denaturants and heat.

M Rangarajan1, B Asboth, B S Hartley.   

Abstract

There was no inactivation of Mg(2+)-containing Arthrobacter D-xylose isomerase up to 1 h in 0-8 M-urea at 22 degrees C, but over this range there was rapid reversible dissociation into fully active dimers with a midpoint around 4 M-urea, as shown by gradient urea gels with an activity stain, and by ion-exchange chromatography and gel filtration in urea buffers. These dimers must have the A-B* conformation, since the tetramer could dissociate into A-A*, A-B or A-B* dimer conformations, but only residues across the A-B* interface contribute to the active site. The kinetics of inactivation of the Mg(2+)-containing enzyme in 8 M-urea at higher temperatures suggest a partially unfolded Mg-A-B* dimer intermediate with 50% activity, followed by irreversible inactivation coincident with the appearance of unfolded monomer. In 0-4 M guanidinium chloride, a similar reversible dissociation into active dimers occurs, but activity falls, suggesting that A-A* and/or A-B dimers might be part of the mixture. Low concentrations of SDS also give active dimers leading to unfolded monomers, but SDS above 1% (w/v) provides relative stabilization. The apoenzyme is least thermostable (t 1/2 at 80 degrees C, pH 7, = 0.06 h) but Mg2+ stabilizes strongly (t 1/2 = 5.5 h) and Co2+ even more so. Competitive inhibitors or substrates provide a small further stabilization, but this effect is more marked at 80 degrees C, pH 5.5. Together with a marked decrease in optimum pH with temperature, this allows batch isomerizations of glucose under these conditions that produce clean but sweeter syrups.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1497626      PMCID: PMC1132879          DOI: 10.1042/bj2850889

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  10 in total

1.  Electrophoretic analysis of the unfolding of proteins by urea.

Authors:  T E Creighton
Journal:  J Mol Biol       Date:  1979-04-05       Impact factor: 5.469

2.  A new spectrophotometric method for the detection and determination of keto sugars and trioses.

Authors:  Z DISCHE; E BORENFREUND
Journal:  J Biol Chem       Date:  1951-10       Impact factor: 5.157

3.  Mechanism for aldose-ketose interconversion by D-xylose isomerase involving ring opening followed by a 1,2-hydride shift.

Authors:  C A Collyer; K Henrick; D M Blow
Journal:  J Mol Biol       Date:  1990-03-05       Impact factor: 5.469

4.  Cyanate formation in solutions of urea. I. Calculation of cyanate concentrations at different temperature and pH.

Authors:  P Hagel; J J Gerding; W Fieggen; H Bloemendal
Journal:  Biochim Biophys Acta       Date:  1971-09-28

5.  Catalytic mechanism of xylose (glucose) isomerase from Clostridium thermosulfurogenes. Characterization of the structural gene and function of active site histidine.

Authors:  C Y Lee; M Bagdasarian; M H Meng; J G Zeikus
Journal:  J Biol Chem       Date:  1990-11-05       Impact factor: 5.157

6.  Hydrogen ion buffers for biological research.

Authors:  N E Good; G D Winget; W Winter; T N Connolly; S Izawa; R M Singh
Journal:  Biochemistry       Date:  1966-02       Impact factor: 3.162

7.  Mechanism of D-fructose isomerization by Arthrobacter D-xylose isomerase.

Authors:  M Rangarajan; B S Hartley
Journal:  Biochem J       Date:  1992-04-01       Impact factor: 3.857

8.  D-Xylose (D-glucose) isomerase from Arthrobacter strain N.R.R.L. B3728. Gene cloning, sequence and expression.

Authors:  T Loviny-Anderton; P C Shaw; M K Shin; B S Hartley
Journal:  Biochem J       Date:  1991-07-01       Impact factor: 3.857

9.  D-Xylose (D-glucose) isomerase from Arthrobacter strain N.R.R.L. B3728. Purification and properties.

Authors:  C A Smith; M Rangarajan; B S Hartley
Journal:  Biochem J       Date:  1991-07-01       Impact factor: 3.857

10.  Structures of D-xylose isomerase from Arthrobacter strain B3728 containing the inhibitors xylitol and D-sorbitol at 2.5 A and 2.3 A resolution, respectively.

Authors:  K Henrick; C A Collyer; D M Blow
Journal:  J Mol Biol       Date:  1989-07-05       Impact factor: 5.469

  10 in total
  9 in total

1.  The stability of extracellular beta-glucosidase from Aspergillus niger is significantly enhanced by non-covalently attached polysaccharides.

Authors:  M H Rashid; K S Siddiqui
Journal:  Folia Microbiol (Praha)       Date:  1996       Impact factor: 2.099

2.  Thermotoga neapolitana homotetrameric xylose isomerase is expressed as a catalytically active and thermostable dimer in Escherichia coli.

Authors:  J M Hess; V Tchernajenko; C Vieille; J G Zeikus; R M Kelly
Journal:  Appl Environ Microbiol       Date:  1998-07       Impact factor: 4.792

3.  Activity and thermostability of carboxymethylcellulase from Aspergillus niger is strongly influenced by noncovalently attached polysaccharides.

Authors:  K S Siddiqui; M J Azhar; M H Rashid; M I Rajoka
Journal:  World J Microbiol Biotechnol       Date:  1996-05       Impact factor: 3.312

4.  Stability and identification of active-site residues of carboxymethylcellulases from Aspergillus niger and Cellulomonas biazotea.

Authors:  K S Siddiqui; M J Azhar; M H Rashid; M I Rajoka
Journal:  Folia Microbiol (Praha)       Date:  1997       Impact factor: 2.099

5.  Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.

Authors:  Helena Taberman; Charles S Bury; Mark J van der Woerd; Edward H Snell; Elspeth F Garman
Journal:  J Synchrotron Radiat       Date:  2019-06-24       Impact factor: 2.616

Review 6.  Molecular and industrial aspects of glucose isomerase.

Authors:  S H Bhosale; M B Rao; V V Deshpande
Journal:  Microbiol Rev       Date:  1996-06

7.  Arthrobacter D-xylose isomerase: protein-engineered subunit interfaces.

Authors:  L Varsani; T Cui; M Rangarajan; B S Hartley; J Goldberg; C Collyer; D M Blow
Journal:  Biochem J       Date:  1993-04-15       Impact factor: 3.857

8.  Restoration of a defective Lactococcus lactis xylose isomerase.

Authors:  Joo-Heon Park; Carl A Batt
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

9.  Arthrobacter D-xylose isomerase: chemical modification of carboxy groups and protein engineering of pH optimum.

Authors:  K S Siddiqui; T Loviny-Anderton; M Rangarajan; B S Hartley
Journal:  Biochem J       Date:  1993-12-15       Impact factor: 3.857

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.