Literature DB >> 14975315

High-throughput screening of chromatin immunoprecipitates using CpG-island microarrays.

Matthew J Oberley1, Julissa Tsao, Patrick Yau, Peggy J Farnham.   

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Year:  2004        PMID： 14975315     DOI： 10.1016/S0076-6879(03)76021-2

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


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  53 in total

1.  Using formaldehyde-assisted isolation of regulatory elements (FAIRE) to isolate active regulatory DNA.

Authors:  Jeremy M Simon; Paul G Giresi; Ian J Davis; Jason D Lieb
Journal:  Nat Protoc       Date:  2012-01-19       Impact factor: 13.491

2.  Corepressor for element-1-silencing transcription factor preferentially mediates gene networks underlying neural stem cell fate decisions.

Authors:  Joseph J Abrajano; Irfan A Qureshi; Solen Gokhan; Aldrin E Molero; Deyou Zheng; Aviv Bergman; Mark F Mehler
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-07       Impact factor: 11.205

3.  BCL6 promoter interacts with far upstream sequences with greatly enhanced activating histone modifications in germinal center B cells.

Authors:  Himabindu Ramachandrareddy; Alyssa Bouska; Yulei Shen; Ming Ji; Angie Rizzino; Wing C Chan; Timothy W McKeithan
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-14       Impact factor: 11.205

4.  Mapping determinants of human gene expression by regional and genome-wide association.

Authors:  Vivian G Cheung; Richard S Spielman; Kathryn G Ewens; Teresa M Weber; Michael Morley; Joshua T Burdick
Journal:  Nature       Date:  2005-10-27       Impact factor: 49.962

5.  Unbiased location analysis of E2F1-binding sites suggests a widespread role for E2F1 in the human genome.

Authors:  Mark Bieda; Xiaoqin Xu; Michael A Singer; Roland Green; Peggy J Farnham
Journal:  Genome Res       Date:  2006-04-10       Impact factor: 9.043

6.  Comparison of sample preparation methods for ChIP-chip assays.

Authors:  Henriette O'Geen; Charles M Nicolet; Kim Blahnik; Roland Green; Peggy J Farnham
Journal:  Biotechniques       Date:  2006-11       Impact factor: 1.993

7.  Suz12 binds to silenced regions of the genome in a cell-type-specific manner.

Authors:  Sharon L Squazzo; Henriette O'Geen; Vitalina M Komashko; Sheryl R Krig; Victor X Jin; Sung-wook Jang; Raphael Margueron; Danny Reinberg; Roland Green; Peggy J Farnham
Journal:  Genome Res       Date:  2006-06-02       Impact factor: 9.043

Review 8.  Applying whole-genome studies of epigenetic regulation to study human disease.

Authors:  J D Lieb; S Beck; M L Bulyk; P Farnham; N Hattori; S Henikoff; X S Liu; K Okumura; K Shiota; T Ushijima; J M Greally
Journal:  Cytogenet Genome Res       Date:  2006       Impact factor: 1.636

9.  The coactivator host cell factor-1 mediates Set1 and MLL1 H3K4 trimethylation at herpesvirus immediate early promoters for initiation of infection.

Authors:  Aarthi Narayanan; William T Ruyechan; Thomas M Kristie
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-19       Impact factor: 11.205

10.  The DM domain protein DMRT1 is a dose-sensitive regulator of fetal germ cell proliferation and pluripotency.

Authors:  Anthony D Krentz; Mark W Murphy; Shinseog Kim; Matthew S Cook; Blanche Capel; Rui Zhu; Angabin Matin; Aaron L Sarver; Keith L Parker; Michael D Griswold; Leendert H J Looijenga; Vivian J Bardwell; David Zarkower
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-10       Impact factor: 11.205
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