Literature DB >> 14961367

Amphitrite ornata, a marine worm, contains two dehaloperoxidase genes.

K Han1, S A Woodin, D E Lincoln, K T Fielman, B Ely.   

Abstract

Amphitrite ornata, a terebellid polychaete, inhabits marine environments that are contaminated by biogenically produced halometabolites. These halogenated organic compounds are toxic and quite diverse. To survive in this environment, A. ornata produces a novel dehaloperoxidase (DHP I) that detoxifies haloaromatic compounds. In this study we identified and characterized two dehaloperoxidase genes, designated dhpA and dhpB, from an A. ornata complementary DNA library. The deduced amino acid sequences (DHP A and DHP B) of the two dhp genes both contain 137 amino acid residues, but they differ at 5 amino acid positions. Allelic variation was observed for both genes as well. Polymerase chain reaction-restriction fragment length polymorphism assays of genomic DNA from 19 in individuals showed that each individual contains both the dhpA and the dhpB genes. Therefore, the two types of DHP are encoded by separate genes and are not alleles of a single gene. Furthermore, DHP A and DHP B may have different substrate specificities since they have amino acid differences in the active site.

Entities:  

Year:  2001        PMID: 14961367     DOI: 10.1007/s10126-001-0003-8

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  8 in total

1.  Structure of dehaloperoxidase B at 1.58 A resolution and structural characterization of the AB dimer from Amphitrite ornata.

Authors:  Vesna de Serrano; Jennifer D'Antonio; Stefan Franzen; Reza A Ghiladi
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-04-21

2.  Reactivity of deoxy- and oxyferrous dehaloperoxidase B from Amphitrite ornata: identification of compound II and its ferrous-hydroperoxide precursor.

Authors:  Jennifer D'Antonio; Reza A Ghiladi
Journal:  Biochemistry       Date:  2011-06-15       Impact factor: 3.162

Review 3.  Design of artificial metalloproteins/metalloenzymes by tuning noncovalent interactions.

Authors:  Shun Hirota; Ying-Wu Lin
Journal:  J Biol Inorg Chem       Date:  2017-12-07       Impact factor: 3.358

4.  Internal binding of halogenated phenols in dehaloperoxidase-hemoglobin inhibits peroxidase function.

Authors:  Matthew K Thompson; Michael F Davis; Vesna de Serrano; Francesco P Nicoletti; Barry D Howes; Giulietta Smulevich; Stefan Franzen
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

5.  Spectroscopic and mechanistic investigations of dehaloperoxidase B from Amphitrite ornata.

Authors:  Jennifer D'Antonio; Edward L D'Antonio; Matthew K Thompson; Edmond F Bowden; Stefan Franzen; Tatyana Smirnova; Reza A Ghiladi
Journal:  Biochemistry       Date:  2010-08-10       Impact factor: 3.162

6.  Degradation of sulfide by dehaloperoxidase-hemoglobin from Amphitrite ornata.

Authors:  Francesco P Nicoletti; Matthew K Thompson; Stefan Franzen; Giulietta Smulevich
Journal:  J Biol Inorg Chem       Date:  2011-02-05       Impact factor: 3.358

7.  Tyrosyl radicals in dehaloperoxidase: how nature deals with evolving an oxygen-binding globin to a biologically relevant peroxidase.

Authors:  Rania Dumarieh; Jennifer D'Antonio; Alexandria Deliz-Liang; Tatyana Smirnova; Dimitri A Svistunenko; Reza A Ghiladi
Journal:  J Biol Chem       Date:  2013-10-06       Impact factor: 5.157

8.  A model for the flexibility of the distal histidine in dehaloperoxidase-hemoglobin A based on X-ray crystal structures of the carbon monoxide adduct.

Authors:  Junjie Zhao; Vesna de Serrano; Stefan Franzen
Journal:  Biochemistry       Date:  2014-04-08       Impact factor: 3.162

  8 in total

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