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Literature DB >> 1489916

A model for binding of an antifreeze polypeptide to ice.

Abstract

A model is proposed, based on recent peptide analog and ice crystal etching studies, whereby an alanine-rich, alpha-helical antifreeze polypeptide (AFP) from the winter flounder inhibits the growth of ice crystals by hydrogen bonding of Thr, Asn, and Asp side chains in a specific pattern to the [2021] hexagonal bipyramidal planes of ice. It is further suggested that this mode of binding is unidirectional, maximizing opportunities for packing of AFPs on the ice surface, and that ice crystal growth inhibition occurs by a two-step mechanism involving hydrogen bonding and hydrophobic interpeptide interactions.

Entities: Chemical Species

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Year: 1992 PMID： 1489916 PMCID： PMC1262283 DOI： 10.1016/S0006-3495(92)81750-2

Source DB: PubMed Journal: Biophys J ISSN： 0006-3495 Impact factor: 4.033

7 in total

1. Structure-function relationships in an antifreeze polypeptide. The role of neutral, polar amino acids.

Authors: D Wen; R A Laursen
Journal: J Biol Chem Date: 1992-07-15 Impact factor: 5.157

2. Crystal structure of an antifreeze polypeptide and its mechanistic implications.

Authors: D S Yang; M Sax; A Chakrabartty; C L Hew
Journal: Nature Date: 1988-05-19 Impact factor: 49.962

3. Adsorption inhibition as a mechanism of freezing resistance in polar fishes.

Authors: J A Raymond; A L DeVries
Journal: Proc Natl Acad Sci U S A Date: 1977-06 Impact factor: 11.205

Review 4. Antifreeze glycoproteins from polar fish blood.

Authors: R E Feeney; T S Burcham; Y Yeh
Journal: Annu Rev Biophys Biophys Chem Date: 1986

5. Adsorption of alpha-helical antifreeze peptides on specific ice crystal surface planes.

Authors: C A Knight; C C Cheng; A L DeVries
Journal: Biophys J Date: 1991-02 Impact factor: 4.033

Review 6. Biochemistry of fish antifreeze proteins.

Authors: P L Davies; C L Hew
Journal: FASEB J Date: 1990-05 Impact factor: 5.191

7. Energy-optimized structure of antifreeze protein and its binding mechanism.

Authors: K C Chou
Journal: J Mol Biol Date: 1992-01-20 Impact factor: 5.469

7 in total

24 in total

1. Ice-binding surface of fish type III antifreeze.

Authors: G Chen; Z Jia
Journal: Biophys J Date: 1999-09 Impact factor: 4.033

2. Structure of type I antifreeze protein and mutants in supercooled water.

Authors: S P Graether; C M Slupsky; P L Davies; B D Sykes
Journal: Biophys J Date: 2001-09 Impact factor: 4.033

3. Dynamics of antifreeze glycoproteins in the presence of ice.

Authors: Nelly M Tsvetkova; Brian L Phillips; Viswanathan V Krishnan; Robert E Feeney; William H Fink; John H Crowe; Subhash H Risbud; Fern Tablin; Yin Yeh
Journal: Biophys J Date: 2002-01 Impact factor: 4.033

Review 4. Plants in a cold climate.

Authors: Maggie Smallwood; Dianna J Bowles
Journal: Philos Trans R Soc Lond B Biol Sci Date: 2002-07-29 Impact factor: 6.237

Review 5. Structure and function of antifreeze proteins.

Authors: Peter L Davies; Jason Baardsnes; Michael J Kuiper; Virginia K Walker
Journal: Philos Trans R Soc Lond B Biol Sci Date: 2002-07-29 Impact factor: 6.237

6. Structure and interactions of fish type III antifreeze protein in solution.

Authors: Andrés G Salvay; Frank Gabel; Bernard Pucci; Javier Santos; Eduardo I Howard; Christine Ebel
Journal: Biophys J Date: 2010-07-21 Impact factor: 4.033

7. Antifreeze proteins at the ice/water interface: three calculated discriminating properties for orientation of type I proteins.

Authors: Andrzej Wierzbicki; Pranav Dalal; Thomas E Cheatham; Jared E Knickelbein; A D J Haymet; Jeffry D Madura
Journal: Biophys J Date: 2007-05-25 Impact factor: 4.033

8. Antifreeze protein-induced selective crystallization of a new thermodynamically and kinetically less preferred molecular crystal.

Authors: Sen Wang; Xin Wen; James A Golen; Josh F Arifin; Arnold L Rheingold
Journal: Chemistry Date: 2013-10-09 Impact factor: 5.236

9. Antifreeze proteins bind independently to ice.

Authors: C I DeLuca; R Comley; P L Davies
Journal: Biophys J Date: 1998-03 Impact factor: 4.033

10. Use of proline mutants to help solve the NMR solution structure of type III antifreeze protein.

Authors: H Chao; P L Davies; B D Sykes; F D Sönnichsen
Journal: Protein Sci Date: 1993-09 Impact factor: 6.725