Literature DB >> 1487823

The molecular clock ticks regularly in muroid rodents and hamsters.

C O'hUigin1, W H Li.   

Abstract

Extensive DNA sequence data are used to compare the rates of nucleotide substitution in the mouse, rat, and hamster lineages. A relative rate test using hamster sequences as references shows that the rates of synonymous and nonsynonymous substitution in the mouse and rat lineages are nearly equal and a test using human sequences as references shows that the rates in the mouse, rat, and hamster lineages are also nearly equal. Under the assumptions that the guinea pig lineage and the myomorph (mouse, rat, and hamster) lineage diverged 70-100 million years (Myr) ago and that the rate of nucleotide substitution has been constant in all these lineages since their divergence, the date of the mouse-rat split is estimated to be between 20 and 29 Myr ago, which is considerably older than the date (approximately 12 Myr) suggested by available rodent fossils and considerably younger than the date (approximately 35 Myr) suggested by Wilson and colleagues. The murid-hamster split is estimated to be 1.6 times older than the mouse-rat split.

Entities:  

Mesh:

Substances:

Year:  1992        PMID: 1487823     DOI: 10.1007/bf00171816

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  28 in total

1.  The pattern of mammalian evolution and the relative rate of molecular evolution.

Authors:  S Easteal
Journal:  Genetics       Date:  1990-01       Impact factor: 4.562

2.  The molecular clock runs more slowly in man than in apes and monkeys.

Authors:  W H Li; M Tanimura
Journal:  Nature       Date:  1987 Mar 5-11       Impact factor: 49.962

3.  DNA/DNA HYBRIDIZATION STUDIES OF MUROID RODENTS: SYMMETRY AND RATES OF MOLECULAR EVOLUTION.

Authors:  Elise Brownell
Journal:  Evolution       Date:  1983-09       Impact factor: 3.694

4.  DNA microenvironments and the molecular clock.

Authors:  C Saccone; G Pesole; G Preparata
Journal:  J Mol Evol       Date:  1989-11       Impact factor: 2.395

5.  A pseudo-exon in the functional human alpha A-crystallin gene.

Authors:  C J Jaworski; J Piatigorsky
Journal:  Nature       Date:  1989-02-23       Impact factor: 49.962

6.  Glutamine synthetase gene evolution: a good molecular clock.

Authors:  G Pesole; M P Bozzetti; C Lanave; G Preparata; C Saccone
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-15       Impact factor: 11.205

Review 7.  A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes.

Authors:  W H Li; C I Wu; C C Luo
Journal:  Mol Biol Evol       Date:  1985-03       Impact factor: 16.240

8.  An evaluation of the molecular clock hypothesis using mammalian DNA sequences.

Authors:  W H Li; M Tanimura; P M Sharp
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

9.  The relative rate of DNA evolution in primates.

Authors:  S Easteal
Journal:  Mol Biol Evol       Date:  1991-01       Impact factor: 16.240

10.  Evidence for higher rates of nucleotide substitution in rodents than in man.

Authors:  C I Wu; W H Li
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

View more
  26 in total

1.  Sequence analysis of mouse vomeronasal receptor gene clusters reveals common promoter motifs and a history of recent expansion.

Authors:  Robert P Lane; Tyler Cutforth; Richard Axel; Leroy Hood; Barbara J Trask
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-18       Impact factor: 11.205

2.  Determining and dating recent rodent speciation events by using L1 (LINE-1) retrotransposons.

Authors:  O Verneau; F Catzeflis; A V Furano
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-15       Impact factor: 11.205

Review 3.  The battle of the sexes after fertilization: behaviour of paternal and maternal chromosomes in the early mammalian embryo.

Authors:  T Haaf
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

4.  Ancestral polymorphism of Mhc class II genes in mice: implications for balancing selection and the mammalian molecular clock.

Authors:  S V Edwards; K Chesnut; Y Satta; E K Wakeland
Journal:  Genetics       Date:  1997-06       Impact factor: 4.562

5.  Origin of gene overlap: the case of TCP1 and ACAT2.

Authors:  S Shintani; C O'hUigin; S Toyosawa; V Michalová; J Klein
Journal:  Genetics       Date:  1999-06       Impact factor: 4.562

6.  Unbiased estimation of the rates of synonymous and nonsynonymous substitution.

Authors:  W H Li
Journal:  J Mol Evol       Date:  1993-01       Impact factor: 2.395

7.  Evolution of the CYP2ABFGST gene cluster in rat, and a fine-scale comparison among rodent and primate species.

Authors:  Shengyong Hu; Haoyi Wang; Alyssa A Knisely; Shanti Reddy; David Kovacevic; Zhi Liu; Susan M G Hoffman
Journal:  Genetica       Date:  2007-09-18       Impact factor: 1.082

8.  Immune response in the hamster: definition of a novel IgG not expressed in all hamster strains.

Authors:  J E Coe; R F Schell; M J Ross
Journal:  Immunology       Date:  1995-09       Impact factor: 7.397

9.  Estimating the intensity of male-driven evolution in rodents by using X-linked and Y-linked Ube 1 genes and pseudogenes.

Authors:  B H Chang; W H Li
Journal:  J Mol Evol       Date:  1995-01       Impact factor: 2.395

10.  Evolutionary parameters of the transcribed mammalian genome: an analysis of 2,820 orthologous rodent and human sequences.

Authors:  W Makalowski; M S Boguski
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.