Literature DB >> 11752409

Sequence analysis of mouse vomeronasal receptor gene clusters reveals common promoter motifs and a history of recent expansion.

Robert P Lane1, Tyler Cutforth, Richard Axel, Leroy Hood, Barbara J Trask.   

Abstract

We have analyzed the organization and sequence of 73 V1R genes encoding putative pheromone receptors to identify regulatory features and characterize the evolutionary history of the V1R family. The 73 V1Rs arose from seven ancestral genes around the time of mouse-rat speciation through large local duplications, and this expansion may contribute to speciation events. Orthologous V1R genes appear to have been lost during primate evolution. Exceptional noncoding homology is observed across four V1R subfamilies at one cluster and thus may be important for locus-specific transcriptional regulation.

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Year:  2001        PMID: 11752409      PMCID: PMC117554          DOI: 10.1073/pnas.012608399

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  PipMaker--a web server for aligning two genomic DNA sequences.

Authors:  S Schwartz; Z Zhang; K A Frazer; A Smit; C Riemer; J Bouck; R Gibbs; R Hardison; W Miller
Journal:  Genome Res       Date:  2000-04       Impact factor: 9.043

2.  A map of pheromone receptor activation in the mammalian brain.

Authors:  L Belluscio; G Koentges; R Axel; C Dulac
Journal:  Cell       Date:  1999-04-16       Impact factor: 41.582

3.  The genomic structure of human olfactory receptor genes.

Authors:  A Sosinsky; G Glusman; D Lancet
Journal:  Genomics       Date:  2000-11-15       Impact factor: 5.736

4.  Repression by Ikaros and Aiolos is mediated through histone deacetylase complexes.

Authors:  J Koipally; A Renold; J Kim; K Georgopoulos
Journal:  EMBO J       Date:  1999-06-01       Impact factor: 11.598

5.  Genomic analysis of orthologous mouse and human olfactory receptor loci.

Authors:  R P Lane; T Cutforth; J Young; M Athanasiou; C Friedman; L Rowen; G Evans; R Axel; L Hood; B J Trask
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

6.  A putative pheromone receptor gene expressed in human olfactory mucosa.

Authors:  I Rodriguez; C A Greer; M Y Mok; P Mombaerts
Journal:  Nat Genet       Date:  2000-09       Impact factor: 38.330

7.  Characterization of nonfunctional V1R-like pheromone receptor sequences in human.

Authors:  D Giorgi; C Friedman; B J Trask; S Rouquier
Journal:  Genome Res       Date:  2000-12       Impact factor: 9.043

8.  Sequence diversity and genomic organization of vomeronasal receptor genes in the mouse.

Authors:  K Del Punta; A Rothman; I Rodriguez; P Mombaerts
Journal:  Genome Res       Date:  2000-12       Impact factor: 9.043

9.  The vomeronasal cavity in adult humans.

Authors:  D Trotier; C Eloit; M Wassef; G Talmain; J L Bensimon; K B Døving; J Ferrand
Journal:  Chem Senses       Date:  2000-08       Impact factor: 3.160

10.  Comparative structural and functional analysis of the olfactory receptor genes flanking the human and mouse beta-globin gene clusters.

Authors:  M Bulger; M A Bender; J H van Doorninck; B Wertman; C M Farrell; G Felsenfeld; M Groudine; R Hardison
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

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  27 in total

1.  Relaxed selective pressure on an essential component of pheromone transduction in primate evolution.

Authors:  Emily R Liman; Hideki Innan
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-11       Impact factor: 11.205

2.  Remarkable diversity of mammalian pheromone receptor repertoires.

Authors:  Ivan Rodriguez
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-03       Impact factor: 11.205

3.  Comparative genomic analysis identifies an evolutionary shift of vomeronasal receptor gene repertoires in the vertebrate transition from water to land.

Authors:  Peng Shi; Jianzhi Zhang
Journal:  Genome Res       Date:  2007-01-08       Impact factor: 9.043

4.  Gene cluster lock after pheromone receptor gene choice.

Authors:  Daniele Roppolo; Sarah Vollery; Chen-Da Kan; Christian Lüscher; Marie-Christine Broillet; Ivan Rodriguez
Journal:  EMBO J       Date:  2007-07-05       Impact factor: 11.598

5.  Exceptional LINE density at V1R loci: the Lyon repeat hypothesis revisited on autosomes.

Authors:  Marijo B Kambere; Robert P Lane
Journal:  J Mol Evol       Date:  2009-01-20       Impact factor: 2.395

6.  The vomeronasal organ mediates interspecies defensive behaviors through detection of protein pheromone homologs.

Authors:  Fabio Papes; Darren W Logan; Lisa Stowers
Journal:  Cell       Date:  2010-05-14       Impact factor: 41.582

Review 7.  Chemosensory receptor specificity and regulation.

Authors:  Ryan P Dalton; Stavros Lomvardas
Journal:  Annu Rev Neurosci       Date:  2015-04-22       Impact factor: 12.449

8.  Divergent V1R repertoires in five species: Amplification in rodents, decimation in primates, and a surprisingly small repertoire in dogs.

Authors:  Janet M Young; Marijo Kambere; Barbara J Trask; Robert P Lane
Journal:  Genome Res       Date:  2005-01-14       Impact factor: 9.043

9.  Extreme variability among mammalian V1R gene families.

Authors:  Janet M Young; Hillary F Massa; Li Hsu; Barbara J Trask
Journal:  Genome Res       Date:  2009-12-01       Impact factor: 9.043

10.  Mammalian olfactory receptors.

Authors:  Joerg Fleischer; Heinz Breer; Joerg Strotmann
Journal:  Front Cell Neurosci       Date:  2009-08-27       Impact factor: 5.505

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