Literature DB >> 14871889

Dual functions of single-stranded DNA-binding protein in helicase loading at the bacteriophage T4 DNA replication fork.

Yujie Ma1, Tongsheng Wang, Jana L Villemain, David P Giedroc, Scott W Morrical.   

Abstract

Semi-conservative DNA synthesis reactions catalyzed by the bacteriophage T4 DNA polymerase holoenzyme are initiated by a strand displacement mechanism requiring gp32, the T4 single-stranded DNA (ssDNA)-binding protein, to sequester the displaced strand. After initiation, DNA helicase acquisition by the nascent replication fork leads to a dramatic increase in the rate and processivity of leading strand DNA synthesis. In vitro studies have established that either of two T4-encoded DNA helicases, gp41 or dda, is capable of stimulating strand displacement synthesis. The acquisition of either helicase by the nascent replication fork is modulated by other protein components of the fork including gp32 and, in the case of the gp41 helicase, its mediator/loading protein gp59. Here, we examine the relationships between gp32 and the gp41/gp59 and dda helicase systems, respectively, during T4 replication using altered forms of gp32 defective in either protein-protein or protein-ssDNA interactions. We show that optimal stimulation of DNA synthesis by gp41/gp59 helicase requires gp32-gp59 interactions and is strongly dependent on the stability of ssDNA binding by gp32. Fluorescence assays demonstrate that gp59 binds stoichiometrically to forked DNA molecules; however, gp59-forked DNA complexes are destabilized via protein-protein interactions with the C-terminal "A-domain" fragment of gp32. These and previously published results suggest a model in which a mobile gp59-gp32 cluster bound to lagging strand ssDNA is the target for gp41 helicase assembly. In contrast, stimulation of DNA synthesis by dda helicase requires direct gp32-dda protein-protein interactions and is relatively unaffected by mutations in gp32 that destabilize its ssDNA binding activity. The latter data support a model in which protein-protein interactions with gp32 maintain dda in a proper active state for translocation at the replication fork. The relationship between dda and gp32 proteins in T4 replication appears similar to the relationship observed between the UL9 helicase and ICP8 ssDNA-binding protein in herpesvirus replication.

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Year:  2004        PMID: 14871889     DOI: 10.1074/jbc.M311738200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  23 in total

1.  Assembly of the bacteriophage T4 primosome: single-molecule and ensemble studies.

Authors:  Zhiquan Zhang; Michelle M Spiering; Michael A Trakselis; Faoud T Ishmael; Jun Xi; Stephen J Benkovic; Gordon G Hammes
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-22       Impact factor: 11.205

2.  Origin activation requires both replicative and accessory helicases during T4 infection.

Authors:  J Rodney Brister
Journal:  J Mol Biol       Date:  2008-02-09       Impact factor: 5.469

3.  Templated mutagenesis in bacteriophage T4 involving imperfect direct or indirect sequence repeats.

Authors:  Gary E Schultz; John W Drake
Journal:  Genetics       Date:  2008-02-01       Impact factor: 4.562

4.  Stimulation of UvrD helicase by UvrAB.

Authors:  John Atkinson; Colin P Guy; Chris J Cadman; Geri F Moolenaar; Nora Goosen; Peter McGlynn
Journal:  J Biol Chem       Date:  2009-02-10       Impact factor: 5.157

5.  Control of helicase loading in the coupled DNA replication and recombination systems of bacteriophage T4.

Authors:  Amy M Branagan; Jenny A Klein; Christian S Jordan; Scott W Morrical
Journal:  J Biol Chem       Date:  2013-12-14       Impact factor: 5.157

Review 6.  Single-molecule studies of DNA replisome function.

Authors:  Senthil K Perumal; Hongjun Yue; Zhenxin Hu; Michelle M Spiering; Stephen J Benkovic
Journal:  Biochim Biophys Acta       Date:  2009-08-07

7.  SSB antagonizes RecX-RecA interaction.

Authors:  Dmitry M Baitin; Marielle C Gruenig; Michael M Cox
Journal:  J Biol Chem       Date:  2008-04-01       Impact factor: 5.157

8.  RNA primer handoff in bacteriophage T4 DNA replication: the role of single-stranded DNA-binding protein and polymerase accessory proteins.

Authors:  Scott W Nelson; Ravindra Kumar; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2008-05-28       Impact factor: 5.157

9.  Functional transcriptional regulatory sequence (TRS) RNA binding and helix destabilizing determinants of murine hepatitis virus (MHV) nucleocapsid (N) protein.

Authors:  Sarah C Keane; Pinghua Liu; Julian L Leibowitz; David P Giedroc
Journal:  J Biol Chem       Date:  2012-01-12       Impact factor: 5.157

10.  Regulation of the bacteriophage T4 Dda helicase by Gp32 single-stranded DNA-binding protein.

Authors:  Christian S Jordan; Scott W Morrical
Journal:  DNA Repair (Amst)       Date:  2014-11-14
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