Literature DB >> 1483687

Of palindromes and peptides.

S Ohno1.   

Abstract

On the average, 30% of the residues in a protein are members of peptidic palindromes, tripeptidic and longer. This percentage may go up to 50% in histones and certain other DNA binding proteins. The longest peptidic palindrome encountered thus far was 14 residues in length. However, there is every reason to expect even longer peptidic palindromes in other proteins not yet analyzed.

Mesh:

Substances:

Year:  1992        PMID: 1483687     DOI: 10.1007/bf00220455

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  15 in total

1.  Intrinsic evolution of proteins. The role of peptidic palindromes.

Authors:  S Ohno
Journal:  Riv Biol       Date:  1989

Review 2.  To be or not to be a responder in T-cell responses: ubiquitous oligopeptides in all proteins.

Authors:  S Ohno
Journal:  Immunogenetics       Date:  1991       Impact factor: 2.846

3.  Isolation of a genomic clone encoding the rat histone variant, H1d.

Authors:  K D Cole; J C Kandala; E Kremer; W S Kistler
Journal:  Gene       Date:  1990-05-14       Impact factor: 3.688

4.  Increased virulence of Yersinia pseudotuberculosis by two independent mutations.

Authors:  R Rosqvist; M Skurnik; H Wolf-Watz
Journal:  Nature       Date:  1988-08-11       Impact factor: 49.962

5.  Nucleotide sequence and regulation of a human 90-kDa heat shock protein gene.

Authors:  N F Rebbe; W S Hickman; T J Ley; D W Stafford; S Hickman
Journal:  J Biol Chem       Date:  1989-09-05       Impact factor: 5.157

6.  Sequence and expression of human estrogen receptor complementary DNA.

Authors:  G L Greene; P Gilna; M Waterfield; A Baker; Y Hort; J Shine
Journal:  Science       Date:  1986-03-07       Impact factor: 47.728

7.  The structure of the gene encoding the nucleoprotein of human influenza virus A/PR/8/34.

Authors:  G Winter; S Fields
Journal:  Virology       Date:  1981-10-30       Impact factor: 3.616

8.  Antigenic drift between the haemagglutinin of the Hong Kong influenza strains A/Aichi/2/68 and A/Victoria/3/75.

Authors:  M Verhoeyen; R Fang; W M Jou; R Devos; D Huylebroeck; E Saman; W Fiers
Journal:  Nature       Date:  1980-08-21       Impact factor: 49.962

9.  Molecular genetics of human color vision: the genes encoding blue, green, and red pigments.

Authors:  J Nathans; D Thomas; D S Hogness
Journal:  Science       Date:  1986-04-11       Impact factor: 47.728

10.  A cDNA encoding RAP74, a general initiation factor for transcription by RNA polymerase II.

Authors:  A Finkelstein; C F Kostrub; J Li; D P Chavez; B Q Wang; S M Fang; J Greenblatt; Z F Burton
Journal:  Nature       Date:  1992-01-30       Impact factor: 49.962

View more
  6 in total

1.  An algorithm to find all palindromic sequences in proteins.

Authors:  N Prasanth; M Kirti Vaishnavi; K Sekar
Journal:  J Biosci       Date:  2013-03       Impact factor: 1.826

2.  Can a protein influence the fate of its own coding sequence?: the amino- and carboxyl-terminal regions of H1 histone.

Authors:  S Ohno; M L Becak
Journal:  Proc Natl Acad Sci U S A       Date:  1993-08-01       Impact factor: 11.205

3.  Active sites of ligands and their receptors are made of common peptides that are also found elsewhere.

Authors:  S Ohno
Journal:  J Mol Evol       Date:  1995-01       Impact factor: 2.395

4.  Analyses of the Sequence and Structural Properties Corresponding to Pentapeptide and Large Palindromes in Proteins.

Authors:  Settu Sridhar; Mallapragada Nagamruta; Kunchur Guruprasad
Journal:  PLoS One       Date:  2015-10-14       Impact factor: 3.240

5.  A tale of two symmetrical tails: structural and functional characteristics of palindromes in proteins.

Authors:  Armita Sheari; Mehdi Kargar; Ali Katanforoush; Shahriar Arab; Mehdi Sadeghi; Hamid Pezeshk; Changiz Eslahchi; Sayed-Amir Marashi
Journal:  BMC Bioinformatics       Date:  2008-06-11       Impact factor: 3.169

6.  PPS: A computing engine to find Palindromes in all Protein sequences.

Authors:  Zameer Ahmed; Manickam Gurusaran; Prasanth Narayana; Kala Sekar Dinesh Kumar; Jayapal Mohanapriya; Marthandan Kirti Vaishnavi; Kanagaraj Sekar
Journal:  Bioinformation       Date:  2014-01-29
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.