Literature DB >> 14769043

A possible role for the covalent heme-protein linkage in cytochrome c revealed via comparison of N-acetylmicroperoxidase-8 and a synthetic, monohistidine-coordinated heme peptide.

Aaron B Cowley1, Gudrun S Lukat-Rodgers, Kenton R Rodgers, David R Benson.   

Abstract

N-Acetylmicroperoxidase-8 (1) contains heme and residues 14-21 of horse mitochondrial cytochrome c (cyt c). The two thioether bonds linking protein to heme in cyt c are present in 1, and the native axial ligand His-18 remains coordinated to iron. As an approach to probing structural or functional roles played by the double covalent heme-protein linkage in cyt c, we have initiated a study in which the properties of 1 are compared with those of a synthetic mono-His coordinated heme peptide containing a single covalent linkage (2). One consequence of the greater conformational restriction imposed on peptide conformation in 1 is that His-Fe(III) coordination is approximately 1.4 kcal/mol more favorable in 1 than in 2. This highlights a clear advantage conferred to cyt c by having two covalent heme-protein linkages rather than one: greater thermodynamic stability of the protein fold. EPR (11 K) and resonance Raman (298 K) studies reveal that 1 and 2 exhibit a thermal high-spin/low-spin ferric equilibrium but that low-spin character is considerably more pronounced in 1. In addition, the thioether 2-(methylthio)ethanol (MTE) coordinates 0.5 kcal/mol more strongly to 1 than to 2 in 60:40 H(2)O/CH(3)OH and only triggers the expected conversion of iron to the low-spin state characteristic of ferric cyt c in the case of 1. This demonstrates that the axial ligand field provided by an imidazole and a thioether is too weak to induce a high-spin to low-spin conversion in a ferric porphyrin. Our results suggest that a conformationally constrained double covalent heme-protein linkage, as exists in 1 and its parent protein cyt c, is an effective solution that nature has evolved to circumvent this limitation. We propose that the stronger His-Fe(III) coordination enabled by such a linkage serves to markedly enhance the effective ligand field strength of His-18. Our studies with 1 and 2 suggest that a double covalent linkage in cyt c may also enable energetically more favorable trans ligation of Met-80 than would be possible if only a single linkage were present. This would serve to further increase the stability of the protein fold and perhaps to increase the effective ligand field strength of Met-80 as well.

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Year:  2004        PMID: 14769043     DOI: 10.1021/bi035531p

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

1.  Resonance Raman fingerprinting of multiheme cytochromes from the cytochrome c3 family.

Authors:  Roberto E Di Paolo; Patrícia M Pereira; Inês Gomes; Filipa M A Valente; Inês A C Pereira; Ricardo Franco
Journal:  J Biol Inorg Chem       Date:  2005-12-10       Impact factor: 3.358

2.  Redox infrared markers of the heme and axial ligands in microperoxidase: Bases for the analysis of c-type cytochromes.

Authors:  Laure Marboutin; Alain Boussac; Catherine Berthomieu
Journal:  J Biol Inorg Chem       Date:  2006-06-17       Impact factor: 3.358

3.  Chemical reactivity of Synechococcus sp. PCC 7002 and Synechocystis sp. PCC 6803 hemoglobins: covalent heme attachment and bishistidine coordination.

Authors:  Henry J Nothnagel; Matthew R Preimesberger; Matthew P Pond; Benjamin Y Winer; Emily M Adney; Juliette T J Lecomte
Journal:  J Biol Inorg Chem       Date:  2011-01-15       Impact factor: 3.358

Review 4.  The role of key residues in structure, function, and stability of cytochrome-c.

Authors:  Sobia Zaidi; Md Imtaiyaz Hassan; Asimul Islam; Faizan Ahmad
Journal:  Cell Mol Life Sci       Date:  2013-04-25       Impact factor: 9.261

Review 5.  The chemistry and biochemistry of heme c: functional bases for covalent attachment.

Authors:  Sarah E J Bowman; Kara L Bren
Journal:  Nat Prod Rep       Date:  2008-09-09       Impact factor: 13.423

6.  Geometric constraints for porphyrin binding in helical protein binding sites.

Authors:  Christopher Negron; Christian Fufezan; Ronald L Koder
Journal:  Proteins       Date:  2009-02-01

7.  Heme attachment motif mobility tunes cytochrome c redox potential.

Authors:  Lea V Michel; Tao Ye; Sarah E J Bowman; Benjamin D Levin; Megan A Hahn; Brandy S Russell; Sean J Elliott; Kara L Bren
Journal:  Biochemistry       Date:  2007-09-28       Impact factor: 3.162

8.  Development of a heme protein structure-electrochemical function database.

Authors:  Charles J Reedy; Margaret M Elvekrog; Brian R Gibney
Journal:  Nucleic Acids Res       Date:  2007-10-11       Impact factor: 16.971

9.  Totally synthetic microperoxidase-11.

Authors:  Junichi Tanabe; Koji Nakano; Ryutaro Hirata; Toshiki Himeno; Ryoichi Ishimatsu; Toshihiko Imato; Hirotaka Okabe; Naoki Matsuda
Journal:  R Soc Open Sci       Date:  2018-05-23       Impact factor: 2.963

  9 in total

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