Literature DB >> 14744449

Identification of clinically relevant yeasts by PCR/RFLP.

Anja Trost1, Barbara Graf, Jan Eucker, Orhan Sezer, Kurt Possinger, Ulf B Göbel, Thomas Adam.   

Abstract

For molecular diagnosis of fungal disease using DNA amplification procedures in the routine laboratory, choice of appropriate target structures and rapid and inexpensive identification of amplification products are important prerequisites. Most diagnostic procedures described thus far are characterized by limited applicability, considerable cost for laboratory equipment or low power of discrimination between species. This study aimed at identification of a PCR target appropriate for diagnosis of clinically relevant yeasts and an affordable procedure for characterization of the PCR products to the species level. Here, we describe a PCR-based system using amplification of intergenic spacers ITS1 and ITS2 and restriction length polymorphism of PCR products after sequence-specific enzymatic cleavage. We show the evaluation of the system for clinically relevant Candida species. The simple and inexpensive procedure should be instrumental for rapid identification of medically important yeasts.

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Year:  2004        PMID: 14744449     DOI: 10.1016/j.mimet.2003.10.007

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  18 in total

1.  Use of denaturing high-performance liquid chromatography for rapid detection and identification of seven Candida species.

Authors:  Oliver Goldenberg; Stefanie Herrmann; Thomas Adam; Gina Marjoram; George Hong; Ulf B Göbel; Barbara Graf
Journal:  J Clin Microbiol       Date:  2005-12       Impact factor: 5.948

2.  Autoscreening of restriction endonucleases for PCR-restriction fragment length polymorphism identification of fungal species, with Pleurotus spp. as an example.

Authors:  Zhi-Hui Yang; Ji-Xiang Huang; Yi-Jian Yao
Journal:  Appl Environ Microbiol       Date:  2007-10-26       Impact factor: 4.792

Review 3.  Candida identification: a journey from conventional to molecular methods in medical mycology.

Authors:  Mohammad Zubair Alam; Qamre Alam; Asif Jiman-Fatani; Mohammad Amjad Kamal; Adel M Abuzenadah; Adeel G Chaudhary; Mohammad Akram; Absarul Haque
Journal:  World J Microbiol Biotechnol       Date:  2014-01-01       Impact factor: 3.312

4.  Detection of Candida albicans by culture, serology and PCR in clinical specimens from patients with ulcerative colitis: re-evaluation of an old hypothesis with a new perspective.

Authors:  A Kalkanci; C Tuncer; B Degertekin; A Eren; S Kustimur; M N Ilhan; A Dursun
Journal:  Folia Microbiol (Praha)       Date:  2005       Impact factor: 2.099

5.  Primers for clinical detection of Paracoccidioides brasiliensis.

Authors:  Gioconda San-Blas; Gustavo Niño-Vega; Laura Barreto; Flavia Hebeler-Barbosa; Eduardo Bagagli; Rosa Olivero de Briceño; Rinaldo Poncio Mendes
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

6.  High rate of Exophiala dermatitidis recovery in the airways of patients with cystic fibrosis is associated with pancreatic insufficiency.

Authors:  Nahid Kondori; Marita Gilljam; Anders Lindblad; Bodil Jönsson; Edward R B Moore; Christine Wennerås
Journal:  J Clin Microbiol       Date:  2011-01-05       Impact factor: 5.948

7.  Identification of fungal species by fragment length analysis of the internally transcribed spacer 2 region.

Authors:  C Landlinger; L Basková; S Preuner; B Willinger; V Buchta; T Lion
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2008-12-23       Impact factor: 3.267

8.  Identification of medically important yeast species by sequence analysis of the internal transcribed spacer regions.

Authors:  Shiang Ning Leaw; Hsien Chang Chang; Hsiao Fang Sun; Richard Barton; Jean-Philippe Bouchara; Tsung Chain Chang
Journal:  J Clin Microbiol       Date:  2006-03       Impact factor: 5.948

9.  Identification of medically important Candida and non-Candida yeast species by an oligonucleotide array.

Authors:  Shiang Ning Leaw; Hsien Chang Chang; Richard Barton; Jean-Philippe Bouchara; Tsung Chain Chang
Journal:  J Clin Microbiol       Date:  2007-05-16       Impact factor: 5.948

10.  Capsules from pathogenic and non-pathogenic Cryptococcus spp. manifest significant differences in structure and ability to protect against phagocytic cells.

Authors:  Glauber de S Araujo; Fernanda L Fonseca; Bruno Pontes; Andre Torres; Radames J B Cordero; Rosely M Zancopé-Oliveira; Arturo Casadevall; Nathan B Viana; Leonardo Nimrichter; Marcio L Rodrigues; Eloi S Garcia; Wanderley de Souza; Susana Frases
Journal:  PLoS One       Date:  2012-01-12       Impact factor: 3.240

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