Literature DB >> 14733574

Experimental and theoretical investigation of the 13C and 15N chemical shift tensors in melanostatin-exploring the chemical shift tensor as a structural probe.

Mark Strohmeier1, David M Grant.   

Abstract

The determination of backbone conformations in powdered peptides using 13C and 15N shift tensor information is explored. The 13C and 15N principal shift values in natural abundance 13C and 15N melanostatin (L-Pro-L-Leu-Gly amide) are measured using the FIREMAT technique. Furthermore, the orientation of the C-N bond in the 13C shift principal axis system for the backbone carbons is obtained from the presence of the 13C-14N dipolar coupling. The Ramachandran angles for the title compound are obtained from solid-state NMR data by comparing the experimentally determined shift tensor information to systematic theoretical shielding calculations on N-formyl-L-amino acid-amide models. The effects of geometry optimization and neglect of intermolecular interactions on the theoretical shielding values in the model compounds are investigated. The sets of NMR derived Ramachandran angles are assembled in a set of test structures that are compared to the available single-crystal X-ray structure. Shift tensor calculations on the test structures and the X-ray structure are used to further assess the importance of intermolecular interactions when the shift tensor is used as a structural probe in powdered peptides.

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Year:  2004        PMID: 14733574     DOI: 10.1021/ja037330e

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  7 in total

1.  Determination of 15N chemical shift anisotropy from a membrane-bound protein by NMR spectroscopy.

Authors:  Manoj Kumar Pandey; Subramanian Vivekanandan; Shivani Ahuja; Kumar Pichumani; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Phys Chem B       Date:  2012-06-04       Impact factor: 2.991

2.  Predicting anisotropic thermal displacements for hydrogens from solid-state NMR: a study on hydrogen bonding in polymorphs of palmitic acid.

Authors:  Luther Wang; Fernando J Uribe-Romo; Leonard J Mueller; James K Harper
Journal:  Phys Chem Chem Phys       Date:  2018-03-28       Impact factor: 3.676

3.  How Does an Amide-N Chemical Shift Tensor Vary in Peptides?

Authors:  Alan Poon; Jeff Birn; A Ramamoorthy
Journal:  J Phys Chem B       Date:  2004-10-21       Impact factor: 2.991

4.  Ab initio study of (13)C(alpha) chemical shift anisotropy tensors in peptides.

Authors:  Jeff Birn; Alan Poon; Y Mao; A Ramamoorthy
Journal:  J Am Chem Soc       Date:  2004-07-14       Impact factor: 15.419

5.  Cytochrome-P450-cytochrome-b5 interaction in a membrane environment changes 15N chemical shift anisotropy tensors.

Authors:  Manoj Kumar Pandey; Subramanian Vivekanandan; Shivani Ahuja; Rui Huang; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Phys Chem B       Date:  2013-10-28       Impact factor: 2.991

6.  Quantum chemical calculations of amide-15N chemical shift anisotropy tensors for a membrane-bound cytochrome-b5.

Authors:  Manoj Kumar Pandey; Ayyalusamy Ramamoorthy
Journal:  J Phys Chem B       Date:  2013-01-10       Impact factor: 2.991

7.  Monitoring the Site-Specific Solid-State NMR Data in Oligopeptides.

Authors:  Jiří Czernek; Jiří Brus
Journal:  Int J Mol Sci       Date:  2020-04-13       Impact factor: 5.923

  7 in total

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