Literature DB >> 14730980

Reactions of 4-oxalocrotonate tautomerase and YwhB with 3-halopropiolates: analysis and implications.

Susan C Wang1, William H Johnson, Robert M Czerwinski, Christian P Whitman.   

Abstract

4-Oxalocrotonate tautomerase (4-OT) and YwhB, a 4-OT homologue found in Bacillus subtilis, exhibit a low level hydratase activity that converts trans-3-haloacrylates to acetaldehyde, presumably through a malonate semialdehyde intermediate. The mechanism for the initial transformation of the 3-haloacrylate to malonate semialdehyde involves Pro-1 as well as an arginine, two residues that play critical roles in the 4-OT-catalyzed isomerization reaction and the YwhB-catalyzed tautomerization reaction. These residues are also critical for the trans-3-chloroacrylic acid dehalogenase (CaaD)-catalyzed conversion of trans-3-haloacrylates to malonate semialdehyde. Recently, 3-bromo- and 3-chloropropiolate, the acetylene analogues of 3-haloacrylates, were characterized as potent irreversible inhibitors of CaaD due to the covalent modification of the catalytic proline. In view of these observations, an investigation of the behavior of 4-OT and YwhB with the 3-halopropiolates was undertaken. The results show that these compounds are potent irreversible inhibitors of 4-OT and YwhB with Pro-1 being the sole site of covalent modification by 3-bromopropiolate. The inactivation process could involve the enzyme-catalyzed addition of water to the 3-halopropiolate yielding an acyl halide, which would inactivate the enzyme or be initiated by the nucleophilic attack of Pro-1 at the C-3 position of the 3-halopropiolate in a Michael type reaction. The presence of the halogen along with Arg-11 could facilitate both reactions with the latter causing the polarization of the alpha,beta-unsaturated acids. The 3-halopropiolates are the first identified inhibitors of YwhB and confirm the importance of Pro-1 in its mechanism. In addition, the results set the stage for the use of these compounds as mechanistic probes of the primary as well as low level activities of 4-OT and YwhB.

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Year:  2004        PMID: 14730980     DOI: 10.1021/bi035495u

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Structural and kinetic characterization of two 4-oxalocrotonate tautomerases in Methylibium petroleiphilum strain PM1.

Authors:  Cassidy R Terrell; Elizabeth A Burks; Christian P Whitman; David W Hoffman
Journal:  Arch Biochem Biophys       Date:  2013-07-04       Impact factor: 4.013

2.  Kinetic and structural characterization of DmpI from Helicobacter pylori and Archaeoglobus fulgidus, two 4-oxalocrotonate tautomerase family members.

Authors:  Jeffrey J Almrud; Rakhi Dasgupta; Robert M Czerwinski; Andrew D Kern; Marvin L Hackert; Christian P Whitman
Journal:  Bioorg Chem       Date:  2010-07-18       Impact factor: 5.275

3.  Phenylpyruvate tautomerase activity of trans-3-chloroacrylic acid dehalogenase: evidence for an enol intermediate in the dehalogenase reaction?

Authors:  Gerrit J Poelarends; William H Johnson; Hector Serrano; Christian P Whitman
Journal:  Biochemistry       Date:  2007-07-28       Impact factor: 3.162

4.  A mutational analysis of the active site loop residues in cis-3-Chloroacrylic acid dehalogenase.

Authors:  Gottfried K Schroeder; Jamison P Huddleston; William H Johnson; Christian P Whitman
Journal:  Biochemistry       Date:  2013-06-05       Impact factor: 3.162

5.  Kinetic and stereochemical analysis of YwhB, a 4-oxalocrotonate tautomerase homologue in Bacillus subtilis: mechanistic implications for the YwhB- and 4-oxalocrotonate tautomerase-catalyzed reactions.

Authors:  Susan C Wang; William H Johnson; Robert M Czerwinski; Stacy L Stamps; Christian P Whitman
Journal:  Biochemistry       Date:  2007-09-29       Impact factor: 3.162

6.  Characterization of Cg10062 from Corynebacterium glutamicum: implications for the evolution of cis-3-chloroacrylic acid dehalogenase activity in the tautomerase superfamily.

Authors:  Gerrit J Poelarends; Hector Serrano; Maria D Person; William H Johnson; Christian P Whitman
Journal:  Biochemistry       Date:  2008-07-04       Impact factor: 3.162

7.  Inactivation of Cg10062, a cis-3-chloroacrylic acid dehalogenase homologue in Corynebacterium glutamicum, by (R)- and (S)-oxirane-2-carboxylate: analysis and implications.

Authors:  Brooklyn A Robertson; William H Johnson; Herng-Hsiang Lo; Christian P Whitman
Journal:  Biochemistry       Date:  2008-07-23       Impact factor: 3.162

  7 in total

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