Literature DB >> 14718656

Solution structure of a BolA-like protein from Mus musculus.

Takuma Kasai1, Makoto Inoue, Seizo Koshiba, Takashi Yabuki, Masaaki Aoki, Emi Nunokawa, Eiko Seki, Takayoshi Matsuda, Natsuko Matsuda, Yasuko Tomo, Mikako Shirouzu, Takaho Terada, Naomi Obayashi, Hiroaki Hamana, Naoko Shinya, Ayako Tatsuguchi, Satoko Yasuda, Mayumi Yoshida, Hiroshi Hirota, Yo Matsuo, Kazutoshi Tani, Harukazu Suzuki, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Takanori Kigawa, Shigeyuki Yokoyama.   

Abstract

The BolA-like proteins are widely conserved from prokaryotes to eukaryotes. The BolA-like proteins seem to be involved in cell proliferation or cell-cycle regulation, but the molecular function is still unknown. Here we determined the structure of a mouse BolA-like protein. The overall topology is alphabetabetaalphaalphabetaalpha, in which beta(1) and beta(2) are antiparallel, and beta(3) is parallel to beta(2). This fold is similar to the class II KH fold, except for the absence of the GXXG loop, which is well conserved in the KH fold. The conserved residues in the BolA-like proteins are assembled on the one side of the protein.

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Year:  2004        PMID: 14718656      PMCID: PMC2286707          DOI: 10.1110/ps.03401004

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  29 in total

1.  Structure of the 30S ribosomal subunit.

Authors:  B T Wimberly; D E Brodersen; W M Clemons; R J Morgan-Warren; A P Carter; C Vonrhein; T Hartsch; V Ramakrishnan
Journal:  Nature       Date:  2000-09-21       Impact factor: 49.962

2.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

3.  Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

Authors:  A Nicholls; K A Sharp; B Honig
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4.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

5.  MOLMOL: a program for display and analysis of macromolecular structures.

Authors:  R Koradi; M Billeter; K Wüthrich
Journal:  J Mol Graph       Date:  1996-02

6.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

8.  Structural basis for recognition of the intron branch site RNA by splicing factor 1.

Authors:  Z Liu; I Luyten; M J Bottomley; A C Messias; S Houngninou-Molango; R Sprangers; K Zanier; A Krämer; M Sattler
Journal:  Science       Date:  2001-11-02       Impact factor: 47.728

9.  Functional annotation of a full-length mouse cDNA collection.

Authors:  J Kawai; A Shinagawa; K Shibata; M Yoshino; M Itoh; Y Ishii; T Arakawa; A Hara; Y Fukunishi; H Konno; J Adachi; S Fukuda; K Aizawa; M Izawa; K Nishi; H Kiyosawa; S Kondo; I Yamanaka; T Saito; Y Okazaki; T Gojobori; H Bono; T Kasukawa; R Saito; K Kadota; H Matsuda; M Ashburner; S Batalov; T Casavant; W Fleischmann; T Gaasterland; C Gissi; B King; H Kochiwa; P Kuehl; S Lewis; Y Matsuo; I Nikaido; G Pesole; J Quackenbush; L M Schriml; F Staubli; R Suzuki; M Tomita; L Wagner; T Washio; K Sakai; T Okido; M Furuno; H Aono; R Baldarelli; G Barsh; J Blake; D Boffelli; N Bojunga; P Carninci; M F de Bonaldo; M J Brownstein; C Bult; C Fletcher; M Fujita; M Gariboldi; S Gustincich; D Hill; M Hofmann; D A Hume; M Kamiya; N H Lee; P Lyons; L Marchionni; J Mashima; J Mazzarelli; P Mombaerts; P Nordone; B Ring; M Ringwald; I Rodriguez; N Sakamoto; H Sasaki; K Sato; C Schönbach; T Seya; Y Shibata; K F Storch; H Suzuki; K Toyo-oka; K H Wang; C Weitz; C Whittaker; L Wilming; A Wynshaw-Boris; K Yoshida; Y Hasegawa; H Kawaji; S Kohtsuki; Y Hayashizaki
Journal:  Nature       Date:  2001-02-08       Impact factor: 49.962

10.  Division genes in Escherichia coli are expressed coordinately to cell septum requirements by gearbox promoters.

Authors:  M Aldea; T Garrido; J Pla; M Vicente
Journal:  EMBO J       Date:  1990-11       Impact factor: 11.598

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  28 in total

1.  Human glutaredoxin 3 forms [2Fe-2S]-bridged complexes with human BolA2.

Authors:  Haoran Li; Daphne T Mapolelo; Sajini Randeniya; Michael K Johnson; Caryn E Outten
Journal:  Biochemistry       Date:  2012-02-10       Impact factor: 3.162

2.  NMR structure note--solution structure of a bacterial BolA-like protein XC975 from a plant pathogen Xanthomonas campestris pv. campestris.

Authors:  Ko-Hsin Chin; Fu-Yang Lin; Yu-Chen Hu; Kong Hung Sze; Ping-Chiang Lyu; Shan-Ho Chou
Journal:  J Biomol NMR       Date:  2005-02       Impact factor: 2.835

3.  Histidine 103 in Fra2 is an iron-sulfur cluster ligand in the [2Fe-2S] Fra2-Grx3 complex and is required for in vivo iron signaling in yeast.

Authors:  Haoran Li; Daphne T Mapolelo; Nin N Dingra; Greg Keller; Pamela J Riggs-Gelasco; Dennis R Winge; Michael K Johnson; Caryn E Outten
Journal:  J Biol Chem       Date:  2010-10-26       Impact factor: 5.157

4.  hBolA, novel non-classical secreted proteins, belonging to different BolA family with functional divergence.

Authors:  Yu-Bo Zhou; Jia-Bing Cao; Bing-Bing Wan; Xin-Rong Wang; Guo-Hui Ding; Hong Zhu; Hong-Meng Yang; Ke-Sheng Wang; Xin Zhang; Ze-Guang Han
Journal:  Mol Cell Biochem       Date:  2008-06-12       Impact factor: 3.396

5.  Green tea catechin extract in intervention of chronic breast cell carcinogenesis induced by environmental carcinogens.

Authors:  Kusum Rathore; Hwa-Chain Robert Wang
Journal:  Mol Carcinog       Date:  2011-08-31       Impact factor: 4.784

Review 6.  Coming into view: eukaryotic iron chaperones and intracellular iron delivery.

Authors:  Caroline C Philpott
Journal:  J Biol Chem       Date:  2012-03-02       Impact factor: 5.157

7.  Stress Response Protein BolA Influences Fitness and Promotes Salmonella enterica Serovar Typhimurium Virulence.

Authors:  Dalila Mil-Homens; Susana Barahona; Ricardo N Moreira; Inês J Silva; Sandra N Pinto; Arsénio M Fialho; Cecília M Arraiano
Journal:  Appl Environ Microbiol       Date:  2018-04-02       Impact factor: 4.792

8.  Solution-state NMR structure of the putative morphogene protein BolA (PFE0790c) from Plasmodium falciparum.

Authors:  Garry W Buchko; Adelinda Yee; Anthony Semesi; Peter J Myler; Cheryl H Arrowsmith; Raymond Hui
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-04-18       Impact factor: 1.056

9.  Using evolutionary conserved modules in gene networks as a strategy to leverage high throughput gene expression queries.

Authors:  Jeanne M Serb; Megan C Orr; M Heather West Greenlee
Journal:  PLoS One       Date:  2010-09-02       Impact factor: 3.240

Review 10.  Breaking through the stress barrier: the role of BolA in Gram-negative survival.

Authors:  Inês Batista Guinote; Ricardo Neves Moreira; Susana Barahona; Patrick Freire; Miguel Vicente; Cecília Maria Arraiano
Journal:  World J Microbiol Biotechnol       Date:  2014-07-20       Impact factor: 3.312

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