Literature DB >> 14715886

ABRF-ESRG'03: analysis of a PVDF-bound known protein with a homogeneous amino-terminus.

Scott D Buckel1, Richard G Cook, J Myron Crawford, Nancy Denslow, Joseph Fernandez, Ben J Madden, John M Neveu.   

Abstract

The Association of Biomolecular Resource Facilities 2003 Edman Sequencing Research Group (ABRF-ESRG'03) sample is the 15th in a series of studies designed to allow participating members to evaluate their abilities to analyze the N-terminus of a protein or peptide using automated Edman degradation chemistry. It is a follow-up study to the ESRG'02 sample, which was a single protein with a heterogeneous N-terminus. Both the 2002 and 2003 samples were obtained from the same protein complex and were resolved by SDS-PAGE followed by electrophoretic transfer to PVDF membrane. The ABRF-ESRG'03 sample had an apparent molecular weight of 49 kDa and a single N-terminus, with initial yields of approximately 2 pmol. Participants were asked to sequence 25 residues and return their results to the ESRG for analysis along with two completed surveys and an area/pmol table for repetitive and initial yield calculations. Data for 46 responses are presented which include initial yields, repetitive yields, sequencer performance, and ability to identify the protein.

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Year:  2003        PMID: 14715886      PMCID: PMC2279968     

Source DB:  PubMed          Journal:  J Biomol Tech        ISSN: 1524-0215


  2 in total

1.  ABRF-98SEQ: Evaluation of peptide sequencing at high sensitivity.

Authors:  W J Henzel; A Admon; S A Carr; G Davis; K De Jongh; W Lane; M Rohde; L Steinke
Journal:  J Biomol Tech       Date:  2000-06

2.  ABRF-2002ESRG, a difficult sequence: Analysis of a PVDF-bound known protein with a heterogeneous amino-terminus.

Authors:  Scott D Buckel; Richard G Cook; J Myron Crawford; David R Dupont; Ben J Madden; John M Neveu; Laurey Steinke; Joseph Fernandez
Journal:  J Biomol Tech       Date:  2002-12
  2 in total
  3 in total

Review 1.  A Review of the Scientific Rigor, Reproducibility, and Transparency Studies Conducted by the ABRF Research Groups.

Authors:  Sheenah M Mische; Nancy C Fisher; Susan M Meyn; Katia Sol-Church; Rebecca L Hegstad-Davies; Frances Weis-Garcia; Marie Adams; John M Ashton; Kym M Delventhal; Julie A Dragon; Laura Holmes; Pratik Jagtap; Kristopher E Kubow; Christopher E Mason; Magnus Palmblad; Brian C Searle; Christoph W Turck; Kevin L Knudtson
Journal:  J Biomol Tech       Date:  2020-04

2.  ABRF ESRG 2005 study: identification of seven modified amino acids by Edman sequencing.

Authors:  D Brune; N D Denslow; R Kobayashi; W S Lane; J W Leone; B J Madden; J M Neveu; J Pohl
Journal:  J Biomol Tech       Date:  2006-12

3.  ABRF ESRG 2006 study: Edman sequencing as a method for polypeptide quantitation.

Authors:  D C Brune; B Hampton; R Kobayashi; J W Leone; K D Linse; J Pohl; R S Thoma; N D Denslow
Journal:  J Biomol Tech       Date:  2007-12
  3 in total

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