Literature DB >> 14713954

Prp5 bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA.

Yong-Zhen Xu1, Catherine M Newnham, Sei Kameoka, Tao Huang, Maria M Konarska, Charles C Query.   

Abstract

Communication between U1 and U2 snRNPs is critical during pre-spliceosome assembly; yet, direct connections have not been observed. To investigate this assembly step, we focused on Prp5, an RNA-dependent ATPase of the DExD/H family. We identified homologs of Saccharomyces cerevisiae Prp5 in humans (hPrp5) and Schizosaccharomyces pombe (SpPrp5), and investigated their interactions and function. Depletion and reconstitution of SpPrp5 from extracts demonstrate that ATP binding and hydrolysis by Prp5 are required for pre-spliceosome complex A formation. hPrp5 and SpPrp5 are each physically associated with both U1 and U2 snRNPs; Prp5 contains distinct U1- and U2-interacting domains that are required for pre-spliceosome assembly; and, we observe a Prp5-associated U1/U2 complex in S. pombe. Together, these data are consistent with Prp5 being a bridge between U1 and U2 snRNPs at the time of pre-spliceosome formation.

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Year:  2004        PMID: 14713954      PMCID: PMC1271757          DOI: 10.1038/sj.emboj.7600050

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  46 in total

1.  Initial recognition of U12-dependent introns requires both U11/5' splice-site and U12/branchpoint interactions.

Authors:  M J Frilander; J A Steitz
Journal:  Genes Dev       Date:  1999-04-01       Impact factor: 11.361

Review 2.  Helicase structure and mechanism.

Authors:  Jonathan M Caruthers; David B McKay
Journal:  Curr Opin Struct Biol       Date:  2002-02       Impact factor: 6.809

Review 3.  Mechanical devices of the spliceosome: motors, clocks, springs, and things.

Authors:  J P Staley; C Guthrie
Journal:  Cell       Date:  1998-02-06       Impact factor: 41.582

4.  Phosphorylation of spliceosomal protein SAP 155 coupled with splicing catalysis.

Authors:  C Wang; K Chua; W Seghezzi; E Lees; O Gozani; R Reed
Journal:  Genes Dev       Date:  1998-05-15       Impact factor: 11.361

5.  The Saccharomyces cerevisiae Prp5 protein has RNA-dependent ATPase activity with specificity for U2 small nuclear RNA.

Authors:  C L O'Day; G Dalbadie-McFarland; J Abelson
Journal:  J Biol Chem       Date:  1996-12-27       Impact factor: 5.157

Review 6.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

7.  ATP can be dispensable for prespliceosome formation in yeast.

Authors:  R Perriman; M Ares
Journal:  Genes Dev       Date:  2000-01-01       Impact factor: 11.361

8.  Invariant U2 RNA sequences bordering the branchpoint recognition region are essential for interaction with yeast SF3a and SF3b subunits.

Authors:  D Yan; M Ares
Journal:  Mol Cell Biol       Date:  1996-03       Impact factor: 4.272

9.  Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals.

Authors:  N Abovich; M Rosbash
Journal:  Cell       Date:  1997-05-02       Impact factor: 41.582

10.  Combined biochemical and electron microscopic analyses reveal the architecture of the mammalian U2 snRNP.

Authors:  A Krämer; P Grüter; K Gröning; B Kastner
Journal:  J Cell Biol       Date:  1999-06-28       Impact factor: 10.539

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  47 in total

1.  The human 18S U11/U12 snRNP contains a set of novel proteins not found in the U2-dependent spliceosome.

Authors:  Cindy L Will; Claudia Schneider; Markus Hossbach; Henning Urlaub; Reinhard Rauhut; Sayda Elbashir; Thomas Tuschl; Reinhard Lührmann
Journal:  RNA       Date:  2004-06       Impact factor: 4.942

2.  p54(nrb) associates with the 5' splice site within large transcription/splicing complexes.

Authors:  Sei Kameoka; Paula Duque; Maria M Konarska
Journal:  EMBO J       Date:  2004-04-01       Impact factor: 11.598

3.  A U1-U2 snRNP interaction network during intron definition.

Authors:  Wei Shao; Hyun-Soo Kim; Yang Cao; Yong-Zhen Xu; Charles C Query
Journal:  Mol Cell Biol       Date:  2011-11-07       Impact factor: 4.272

4.  Proximity of the U12 snRNA with both the 5' splice site and the branch point during early stages of spliceosome assembly.

Authors:  Mikko J Frilander; Xiaojuan Meng
Journal:  Mol Cell Biol       Date:  2005-06       Impact factor: 4.272

5.  Protein composition and electron microscopy structure of affinity-purified human spliceosomal B complexes isolated under physiological conditions.

Authors:  Jochen Deckert; Klaus Hartmuth; Daniel Boehringer; Nastaran Behzadnia; Cindy L Will; Berthold Kastner; Holger Stark; Henning Urlaub; Reinhard Lührmann
Journal:  Mol Cell Biol       Date:  2006-07       Impact factor: 4.272

6.  The U11-48K protein contacts the 5' splice site of U12-type introns and the U11-59K protein.

Authors:  Janne J Turunen; Cindy L Will; Michael Grote; Reinhard Lührmann; Mikko J Frilander
Journal:  Mol Cell Biol       Date:  2008-03-17       Impact factor: 4.272

7.  Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex.

Authors:  Matthew V Kotlajich; Tara L Crabb; Klemens J Hertel
Journal:  Mol Cell Biol       Date:  2008-12-08       Impact factor: 4.272

8.  The RNA helicase DDX46 inhibits innate immunity by entrapping m6A-demethylated antiviral transcripts in the nucleus.

Authors:  Qingliang Zheng; Jin Hou; Ye Zhou; Zhenyang Li; Xuetao Cao
Journal:  Nat Immunol       Date:  2017-08-28       Impact factor: 25.606

Review 9.  Ribonucleoprotein multimers and their functions.

Authors:  Franziska Bleichert; Susan J Baserga
Journal:  Crit Rev Biochem Mol Biol       Date:  2010-10       Impact factor: 8.250

10.  Characterization and in vivo functional analysis of the Schizosaccharomyces pombe ICLN gene.

Authors:  Adrien Barbarossa; Etienne Antoine; Henry Neel; Thierry Gostan; Johann Soret; Rémy Bordonné
Journal:  Mol Cell Biol       Date:  2013-12-02       Impact factor: 4.272

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