Literature DB >> 14703160

Rank-shaping regularization of exponential spectral analysis for application to functional parametric mapping.

Federico E Turkheimer1, Rainer Hinz, Roger N Gunn, John A D Aston, Steve R Gunn, Vincent J Cunningham.   

Abstract

Compartmental models are widely used for the mathematical modelling of dynamic studies acquired with positron emission tomography (PET). The numerical problem involves the estimation of a sum of decaying real exponentials convolved with an input function. In exponential spectral analysis (SA), the nonlinear estimation of the exponential functions is replaced by the linear estimation of the coefficients of a predefined set of exponential basis functions. This set-up guarantees fast estimation and attainment of the global optimum. SA, however, is hampered by high sensitivity to noise and, because of the positivity constraints implemented in the algorithm, cannot be extended to reference region modelling. In this paper, SA limitations are addressed by a new rank-shaping (RS) estimator that defines an appropriate regularization over an unconstrained least-squares solution obtained through singular value decomposition of the exponential base. Shrinkage parameters are conditioned on the expected signal-to-noise ratio. Through application to simulated and real datasets, it is shown that RS ameliorates and extends SA properties in the case of the production of functional parametric maps from PET studies.

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Year:  2003        PMID: 14703160     DOI: 10.1088/0031-9155/48/23/002

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  11 in total

1.  Using a reference tissue model with spatial constraint to quantify [11C]Pittsburgh compound B PET for early diagnosis of Alzheimer's disease.

Authors:  Yun Zhou; Susan M Resnick; Weiguo Ye; Hong Fan; Daniel P Holt; William E Klunk; Chester A Mathis; Robert Dannals; Dean F Wong
Journal:  Neuroimage       Date:  2007-03-16       Impact factor: 6.556

2.  Model-free quantification of dynamic PET data using nonparametric deconvolution.

Authors:  Francesca Zanderigo; Ramin V Parsey; R Todd Ogden
Journal:  J Cereb Blood Flow Metab       Date:  2015-04-15       Impact factor: 6.200

3.  Voxelwise quantification of [(11)C](R)-rolipram PET data: a comparison between model-based and data-driven methods.

Authors:  Gaia Rizzo; Mattia Veronese; Paolo Zanotti-Fregonara; Alessandra Bertoldo
Journal:  J Cereb Blood Flow Metab       Date:  2013-03-20       Impact factor: 6.200

4.  The PET Radioligand 18F-FIMX Images and Quantifies Metabotropic Glutamate Receptor 1 in Proportion to the Regional Density of Its Gene Transcript in Human Brain.

Authors:  Paolo Zanotti-Fregonara; Rong Xu; Sami S Zoghbi; Jeih-San Liow; Masahiro Fujita; Mattia Veronese; Robert L Gladding; Denise Rallis-Frutos; Jinsoo Hong; Victor W Pike; Robert B Innis
Journal:  J Nucl Med       Date:  2015-10-29       Impact factor: 10.057

5.  Quantification of ligand PET studies using a reference region with a displaceable fraction: application to occupancy studies with [(11)C]-DASB as an example.

Authors:  Federico E Turkheimer; Sudhakar Selvaraj; Rainer Hinz; Venkatesha Murthy; Zubin Bhagwagar; Paul Grasby; Oliver Howes; Lula Rosso; Subrata K Bose
Journal:  J Cereb Blood Flow Metab       Date:  2011-08-03       Impact factor: 6.200

6.  Smoothing dynamic positron emission tomography time courses using functional principal components.

Authors:  Ci-Ren Jiang; John A D Aston; Jane-Ling Wang
Journal:  Neuroimage       Date:  2009-04-01       Impact factor: 6.556

Review 7.  Spectral Analysis of Dynamic PET Studies: A Review of 20 Years of Method Developments and Applications.

Authors:  Mattia Veronese; Gaia Rizzo; Alessandra Bertoldo; Federico E Turkheimer
Journal:  Comput Math Methods Med       Date:  2016-12-05       Impact factor: 2.238

8.  Quantification of [(11)C]PIB PET for imaging myelin in the human brain: a test-retest reproducibility study in high-resolution research tomography.

Authors:  Mattia Veronese; Benedetta Bodini; Daniel García-Lorenzo; Marco Battaglini; Salvatore Bongarzone; Claude Comtat; Michel Bottlaender; Bruno Stankoff; Federico E Turkheimer
Journal:  J Cereb Blood Flow Metab       Date:  2015-06-10       Impact factor: 6.200

9.  Acute induction of anxiety in humans by delta-9-tetrahydrocannabinol related to amygdalar cannabinoid-1 (CB1) receptors.

Authors:  Sagnik Bhattacharyya; Alice Egerton; Euitae Kim; Lula Rosso; Daniela Riano Barros; Alexander Hammers; Michael Brammer; Federico E Turkheimer; Oliver D Howes; Philip McGuire
Journal:  Sci Rep       Date:  2017-11-03       Impact factor: 4.379

10.  Test-retest reproducibility of cannabinoid-receptor type 1 availability quantified with the PET ligand [¹¹C]MePPEP.

Authors:  Daniela A Riaño Barros; Colm J McGinnity; Lula Rosso; Rolf A Heckemann; Oliver D Howes; David J Brooks; John S Duncan; Federico E Turkheimer; Matthias J Koepp; Alexander Hammers
Journal:  Neuroimage       Date:  2014-04-13       Impact factor: 6.556

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