Literature DB >> 14698612

The origins and implications of Aluternative splicing.

Jenny Kreahling1, Brenton R Graveley.   

Abstract

Ten percent of the human genome is composed of highly repetitive DNA sequences called Alu elements. It has recently been found that at least 5% of all human alternative exons are derived from Alu elements. Moreover, single nucleotide mutations can convert either alternative or otherwise silent Alu elements into constitutive exons and this can lead to the development of human disease. These results provide new insights into the function and dangers of 'junk DNA' in the human genome.

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Year:  2004        PMID: 14698612     DOI: 10.1016/j.tig.2003.11.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  25 in total

1.  Widespread RNA editing of embedded alu elements in the human transcriptome.

Authors:  Dennis D Y Kim; Thomas T Y Kim; Thomas Walsh; Yoshifumi Kobayashi; Tara C Matise; Steven Buyske; Abram Gabriel
Journal:  Genome Res       Date:  2004-09       Impact factor: 9.043

Review 2.  Alternative splicing and evolution: diversification, exon definition and function.

Authors:  Hadas Keren; Galit Lev-Maor; Gil Ast
Journal:  Nat Rev Genet       Date:  2010-04-08       Impact factor: 53.242

3.  Evolution of prokaryotic genes by shift of stop codons.

Authors:  Anna A Vakhrusheva; Marat D Kazanov; Andrey A Mironov; Georgii A Bazykin
Journal:  J Mol Evol       Date:  2010-11-17       Impact factor: 2.395

4.  Two different transposable elements inserted in flavonoid 3',5'-hydroxylase gene contribute to pink flower coloration in Gentiana scabra.

Authors:  Takashi Nakatsuka; Masahiro Nishihara; Keiichiro Mishiba; Hiroshi Hirano; Saburo Yamamura
Journal:  Mol Genet Genomics       Date:  2005-12-14       Impact factor: 3.291

5.  5'-Transducing SVA retrotransposon groups spread efficiently throughout the human genome.

Authors:  Annette Damert; Julija Raiz; Axel V Horn; Johannes Löwer; Hui Wang; Jinchuan Xing; Mark A Batzer; Roswitha Löwer; Gerald G Schumann
Journal:  Genome Res       Date:  2009-08-03       Impact factor: 9.043

6.  Construction of Japanese BAC library Yamato-2 (JY2): a set of 330K clone resources of damage-minimized DNA taken from a genetically established Japanese individual.

Authors:  Yasunobu Terabayashi; Keiko Morita; Joon Young Park; Soichiro Saito; Takashi Shiina; Hidetoshi Inoko; Isamu Ishiwata; Kazuhiro E Fujimori; Takashi Hirano
Journal:  Hum Cell       Date:  2011-05-25       Impact factor: 4.174

Review 7.  SINEs point to abundant editing in the human genome.

Authors:  Joshua DeCerbo; Gordon G Carmichael
Journal:  Genome Biol       Date:  2005-03-31       Impact factor: 13.583

Review 8.  Altering Genomic Integrity: Heavy Metal Exposure Promotes Transposable Element-Mediated Damage.

Authors:  Maria E Morales; Geraldine Servant; Catherine Ade; Astrid M Roy-Engel
Journal:  Biol Trace Elem Res       Date:  2015-03-14       Impact factor: 3.738

Review 9.  The impact of retrotransposons on human genome evolution.

Authors:  Richard Cordaux; Mark A Batzer
Journal:  Nat Rev Genet       Date:  2009-10       Impact factor: 53.242

10.  A unique, consistent identifier for alternatively spliced transcript variants.

Authors:  Alberto Riva; Graziano Pesole
Journal:  PLoS One       Date:  2009-10-28       Impact factor: 3.240

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