Literature DB >> 14696377

TEXTAL system: artificial intelligence techniques for automated protein model building.

Thomas R Ioerger1, James C Sacchettini.   

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Year:  2003        PMID: 14696377     DOI: 10.1016/S0076-6879(03)74012-9

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


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  18 in total

1.  Purification, crystallization and X-ray diffraction analysis of the C-terminal protease domain of Venezuelan equine encephalitis virus nsP2.

Authors:  Andrew T Russo; Stanley J Watowich
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-05-05

2.  Creating protein models from electron-density maps using particle-filtering methods.

Authors:  Frank DiMaio; Dmitry A Kondrashov; Eduard Bitto; Ameet Soni; Craig A Bingman; George N Phillips; Jude W Shavlik
Journal:  Bioinformatics       Date:  2007-10-12       Impact factor: 6.937

3.  Structure of the MTIP-MyoA complex, a key component of the malaria parasite invasion motor.

Authors:  Jürgen Bosch; Stewart Turley; Thomas M Daly; Stephen M Bogh; Michelle L Villasmil; Claudia Roach; Na Zhou; Joanne M Morrisey; Akhil B Vaidya; Lawrence W Bergman; Wim G J Hol
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-17       Impact factor: 11.205

4.  Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7.

Authors:  Gerrit Langer; Serge X Cohen; Victor S Lamzin; Anastassis Perrakis
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

5.  Modeling discrete heterogeneity in X-ray diffraction data by fitting multi-conformers.

Authors:  Henry van den Bedem; Ankur Dhanik; Jean Claude Latombe; Ashley M Deacon
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-09-16

6.  Spherical-harmonic decomposition for molecular recognition in electron-density maps.

Authors:  Frank P DiMaio; Ameet B Soni; George N Phillips; Jude W Shavlik
Journal:  Int J Data Min Bioinform       Date:  2009       Impact factor: 0.667

7.  Rapid model building of beta-sheets in electron-density maps.

Authors:  Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-02-12

8.  Probabilistic ensembles for improved inference in protein-structure determination.

Authors:  Ameet Soni; Jude Shavlik
Journal:  J Bioinform Comput Biol       Date:  2012-02       Impact factor: 1.122

9.  Rapid model building of alpha-helices in electron-density maps.

Authors:  Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-02-12

10.  Rapid chain tracing of polypeptide backbones in electron-density maps.

Authors:  Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-02-12
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