Literature DB >> 14695292

Picosecond internal dynamics of lysozyme as affected by thermal unfolding in nonaqueous environment.

A De Francesco1, M Marconi, S Cinelli, G Onori, A Paciaroni.   

Abstract

A neutron-scattering investigation of the internal picosecond dynamics of lysozyme solvated in glycerol as a function of temperature in the range 200-410 K has been undertaken. The inelastic contribution to the measured intensity is characterized by the presence of a bump generally known as "boson peak", clearly distinguishable at low temperature. When the temperature is increased the quasielastic component of the spectrum becomes more and more intrusive and progressively overwhelms the vibrational bump. This happens especially for T > 345 K when the protein goes through an unfolding process, which leads to the complete denaturation. The quasielastic term is the superposition of two components whose intensities and linewidths have been studied as a function of temperature. The slower component describes motions with characteristic times of approximately 4 ps corresponding to reorientations of polypeptide side chains. Both the intensity and linewidth of this kind of relaxations show two distinct regimes with a crossover in the temperature range where the melting process occurs, thus suggesting the presence of a dynamical transition correlated to the protein unfolding. Conversely the faster component might be ascribed to the local dynamics of hydrogen atoms caged by the nearest neighbors with characteristic time of approximately 0.3 ps.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 14695292      PMCID: PMC1303815          DOI: 10.1016/S0006-3495(04)74126-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  34 in total

1.  Fast dynamics of halophilic malate dehydrogenase and BSA measured by neutron scattering under various solvent conditions influencing protein stability.

Authors:  M Tehei; D Madern; C Pfister; G Zaccai
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-04       Impact factor: 11.205

2.  A measure of conformational entropy change during thermal protein unfolding using neutron spectroscopy.

Authors:  Jörg Fitter
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

3.  Effect of the environment on the protein dynamical transition: a neutron scattering study.

Authors:  Alessandro Paciaroni; Stefania Cinelli; Giuseppe Onori
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

4.  Dynamic instability of liquidlike motions in a globular protein observed by inelastic neutron scattering.

Authors: 
Journal:  Phys Rev Lett       Date:  1990-08-20       Impact factor: 9.161

5.  The energy landscapes and motions of proteins.

Authors:  H Frauenfelder; S G Sligar; P G Wolynes
Journal:  Science       Date:  1991-12-13       Impact factor: 47.728

6.  Internal molecular motions of bacteriorhodopsin: hydration-induced flexibility studied by quasielastic incoherent neutron scattering using oriented purple membranes.

Authors:  J Fitter; R E Lechner; G Buldt; N A Dencher
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-23       Impact factor: 11.205

7.  Hinge-bending motion in citrate synthase arising from normal mode calculations.

Authors:  O Marques; Y H Sanejouand
Journal:  Proteins       Date:  1995-12

8.  Hydrogen-exchange evidence for distinct structural classes in globular proteins.

Authors:  R B Gregory; R Lumry
Journal:  Biopolymers       Date:  1985-02       Impact factor: 2.505

9.  Activity and stability of a thermostable alpha-amylase compared to its mesophilic homologue: mechanisms of thermal adaptation.

Authors:  J Fitter; R Herrmann; N A Dencher; A Blume; T Hauss
Journal:  Biochemistry       Date:  2001-09-04       Impact factor: 3.162

10.  Heme-solvent coupling: a Mössbauer study of myoglobin in sucrose.

Authors:  H Lichtenegger; W Doster; T Kleinert; A Birk; B Sepiol; G Vogl
Journal:  Biophys J       Date:  1999-01       Impact factor: 4.033

View more
  8 in total

1.  Conditioning action of the environment on the protein dynamics studied through elastic neutron scattering.

Authors:  A Paciaroni; E Cornicchi; A De Francesco; M Marconi; G Onori
Journal:  Eur Biophys J       Date:  2006-06-08       Impact factor: 1.733

2.  Controlling the protein dynamical transition with sugar-based bioprotectant matrices: a neutron scattering study.

Authors:  E Cornicchi; M Marconi; G Onori; A Paciaroni
Journal:  Biophys J       Date:  2006-04-14       Impact factor: 4.033

3.  Hemoglobin dynamics in red blood cells: correlation to body temperature.

Authors:  A M Stadler; I Digel; G M Artmann; J P Embs; G Zaccai; G Büldt
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

4.  From powder to solution: hydration dependence of human hemoglobin dynamics correlated to body temperature.

Authors:  A M Stadler; I Digel; J P Embs; T Unruh; M Tehei; G Zaccai; G Büldt; G M Artmann
Journal:  Biophys J       Date:  2009-06-17       Impact factor: 4.033

5.  Internal motions of actin characterized by quasielastic neutron scattering.

Authors:  Satoru Fujiwara; Marie Plazanet; Fumiko Matsumoto; Toshiro Oda
Journal:  Eur Biophys J       Date:  2011-01-20       Impact factor: 1.733

6.  The effect of complex solvents on the structure and dynamics of protein solutions: The case of Lysozyme in trehalose/water mixtures.

Authors:  Pavan K GhattyVenkataKrishna; Gustavo A Carri
Journal:  Eur Phys J E Soft Matter       Date:  2013-02-14       Impact factor: 1.890

7.  Rigidity, secondary structure, and the universality of the boson peak in proteins.

Authors:  Stefania Perticaroli; Jonathan D Nickels; Georg Ehlers; Alexei P Sokolov
Journal:  Biophys J       Date:  2014-06-17       Impact factor: 4.033

8.  How Useful can the Voigt Profile be in Protein Folding Processes?

Authors:  Luka Maisuradze; Gia G Maisuradze
Journal:  Protein J       Date:  2021-01-05       Impact factor: 2.371

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.