Literature DB >> 14693681

Myocardial density and composition: a basis for calculating intracellular metabolite concentrations.

Kalyan C Vinnakota1, James B Bassingthwaighte.   

Abstract

Systems for describing myocardial cellular metabolism with appropriate thermodynamic constraints on reactions have to be on the basis of estimates of intracellular and mitochondrial concentrations of metabolites as driving forces for reactions. This requires that tissue composition itself must be modeled, but there is marked inconsistency in the literature and no full data set on hearts of any species. To formulate a self-consistent set of information on the densities, contents, or concentrations of chemical components and volumes of tissue spaces, we drew on information mostly on rats. From the data on densities, volumes, volume fractions, and mass fractions observed mainly on left ventricular myocardium, cytoplasm, and mitochondria and from morphometric data on cellular components and the vasculature, we constructed a matrix based on conservation laws for density, volume, and constituent composition. The four constituents were water, protein, fat, and solutes (or ash). To take into account the variances in the observed data sets, we used a constrained nonlinear least squares optimization to minimize the differences between the final results and the data sets. The results provide a detailed estimate of cardiac tissue composition, previously unavailable, for the translation of whole tissue concentrations or concentrations per gram protein into estimated local concentrations that are relevant to reaction processes. An example is that the concentrations of phosphocreatine and ATP in cytosolic water space are twice as high as their mean tissue concentrations. This conservation optimization method is applicable to any tissue or organ.

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Year:  2003        PMID: 14693681     DOI: 10.1152/ajpheart.00478.2003

Source DB:  PubMed          Journal:  Am J Physiol Heart Circ Physiol        ISSN: 0363-6135            Impact factor:   4.733


  73 in total

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5.  GENTEX, a general multiscale model for in vivo tissue exchanges and intraorgan metabolism.

Authors:  James B Bassingthwaighte; Gary M Raymond; James D Ploger; Lisa M Schwartz; Thomas R Bukowski
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2006-06-15       Impact factor: 4.226

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7.  Multiple ion binding equilibria, reaction kinetics, and thermodynamics in dynamic models of biochemical pathways.

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8.  Experimentally observed phenomena on cardiac energetics in heart failure emerge from simulations of cardiac metabolism.

Authors:  Fan Wu; Jianyi Zhang; Daniel A Beard
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-08       Impact factor: 11.205

9.  On the theoretical limits of detecting cyclic changes in cardiac high-energy phosphates and creatine kinase reaction kinetics using in vivo ³¹P MRS.

Authors:  Kilian Weiss; Paul A Bottomley; Robert G Weiss
Journal:  NMR Biomed       Date:  2015-04-23       Impact factor: 4.044

10.  Three-dimensional electron microscopy reveals new details of membrane systems for Ca2+ signaling in the heart.

Authors:  Takeharu Hayashi; Maryann E Martone; Zeyun Yu; Andrea Thor; Masahiro Doi; Michael J Holst; Mark H Ellisman; Masahiko Hoshijima
Journal:  J Cell Sci       Date:  2009-04-01       Impact factor: 5.285

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